Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 2
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU83151 Sorghum cytosol 14.56 93.15
OQU83144 Sorghum cytosol 26.02 60.45
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 37.79 59.43
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 32.76 55.64
EER89595 Sorghum cytosol 20.77 51.32
OQU83139 Sorghum cytosol 12.1 50.45
OQU83143 Sorghum cytosol 17.77 47.56
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 11.46 26.42
EER90917 Sorghum cytosol, peroxisome, plasma membrane 14.99 25.18
GSMUA_Achr9P02700_001 Banana cytosol 10.28 24.94
EER90916 Sorghum cytosol 14.78 24.42
GSMUA_Achr9P02720_001 Banana cytosol 10.06 24.16
VIT_14s0081g00350.t01 Wine grape cytosol 13.7 23.97
GSMUA_Achr9P02740_001 Banana cytosol 14.88 23.68
GSMUA_Achr7P12630_001 Banana cytosol 16.49 23.66
GSMUA_Achr9P02690_001 Banana plasma membrane 14.45 23.44
VIT_05s0124g00670.t01 Wine grape cytosol 13.92 22.45
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 12.31 22.37
KXG36379 Sorghum cytosol 9.21 21.55
VIT_05s0165g00140.t01 Wine grape cytosol 10.71 21.46
EES15259 Sorghum cytosol 12.74 21.17
OQU89270 Sorghum cytosol 12.74 21.17
EES07299 Sorghum cytosol, plasma membrane 11.99 21.17
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 12.96 21.01
VIT_19s0014g05330.t01 Wine grape extracellular 12.96 20.9
VIT_13s0047g01220.t01 Wine grape plasma membrane 13.81 20.81
VIT_12s0028g04020.t01 Wine grape plasma membrane 7.07 20.75
Solyc07g061750.2.1 Tomato cytosol 12.85 20.69
VIT_14s0081g00390.t01 Wine grape cytosol 11.35 20.66
EES03848 Sorghum cytosol 12.21 20.5
VIT_12s0059g00130.t01 Wine grape cytosol 8.35 20.47
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 12.74 20.45
OQU80298 Sorghum mitochondrion, plastid 15.2 20.43
VIT_14s0081g00360.t01 Wine grape cytosol 9.1 20.24
VIT_12s0059g00150.t01 Wine grape cytosol 8.35 20.16
EER97054 Sorghum cytosol 12.1 20.11
EER97319 Sorghum plastid 14.13 20.0
VIT_12s0028g03960.t01 Wine grape plasma membrane 8.89 19.95
EER95066 Sorghum cytosol 12.1 19.93
VIT_12s0059g00090.t01 Wine grape cytosol 7.6 19.78
Bra023774.1-P Field mustard plasma membrane 12.85 19.67
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 12.96 19.64
VIT_12s0059g00110.t01 Wine grape cytosol 8.14 19.64
Bra033416.1-P Field mustard cytosol 11.78 19.61
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 12.31 19.59
VIT_05s0029g01420.t01 Wine grape cytosol 13.7 19.51
VIT_14s0081g00420.t01 Wine grape cytosol 12.42 19.5
VIT_05s0102g00030.t01 Wine grape cytosol 12.31 19.49
OQU84849 Sorghum plasma membrane 13.28 19.47
OQU84108 Sorghum cytosol, nucleus, plasma membrane 15.85 19.45
PGSC0003DMT400071072 Potato cytosol 7.6 19.19
VIT_05s0165g00290.t01 Wine grape cytosol 12.31 19.13
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 12.53 19.12
AT4G03460.1 Thale cress peroxisome 12.85 19.11
EER88274 Sorghum cytosol 15.42 19.0
VIT_05s0102g00050.t01 Wine grape nucleus 12.21 18.97
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 10.49 18.96
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 13.49 18.89
VIT_05s0124g00720.t01 Wine grape cytosol 7.6 18.68
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 12.63 18.64
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 13.92 18.6
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 13.38 18.49
Bra000823.1-P Field mustard plasma membrane 8.78 18.47
EES18294 Sorghum plasma membrane 13.81 18.45
VIT_05s0029g01540.t01 Wine grape plasma membrane 13.17 18.44
VIT_12s0059g00050.t01 Wine grape plasma membrane 12.74 18.39
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 10.28 18.36
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 12.74 18.2
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 12.21 18.18
VIT_05s0165g00060.t01 Wine grape cytosol 4.93 18.11
VIT_12s0059g00060.t01 Wine grape cytosol 9.96 18.09
EER87702 Sorghum nucleus 14.24 18.07
VIT_05s0029g01490.t01 Wine grape cytosol 9.21 18.07
KXG36384 Sorghum cytosol 7.71 18.05
VIT_05s0165g00010.t01 Wine grape nucleus 8.89 18.0
EER87700 Sorghum cytosol 15.52 17.99
Bra034209.1-P Field mustard cytosol 11.88 17.79
OQU78058 Sorghum plasma membrane 11.88 17.73
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 12.85 17.73
EER96593 Sorghum plasma membrane 8.99 17.36
VIT_12s0028g03990.t01 Wine grape cytosol 10.92 17.2
KXG27928 Sorghum plasma membrane 12.21 17.17
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 12.21 17.12
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 11.88 17.02
EER95067 Sorghum cytosol, nucleus, plasma membrane 12.53 17.01
VIT_14s0081g00370.t01 Wine grape cytosol 6.1 16.72
AT4G05040.1 Thale cress cytosol 10.17 16.61
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 10.92 16.53
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 12.42 16.45
AT4G14390.1 Thale cress plasma membrane 12.21 16.43
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 13.49 16.41
AT4G03450.1 Thale cress plasma membrane 11.13 16.22
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 12.42 16.18
VIT_05s0124g00460.t01 Wine grape cytosol 4.6 15.93
VIT_12s0028g04010.t01 Wine grape cytosol 7.6 15.85
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 11.35 15.82
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 11.78 15.49
AT4G03480.1 Thale cress mitochondrion 10.6 15.02
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 10.81 14.79
AT4G03440.1 Thale cress cytosol 11.67 14.51
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 12.63 14.34
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 12.53 13.21
VIT_12s0059g00120.t01 Wine grape cytosol 10.06 11.39
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1B6PR00InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:KXG28093ProteinID:KXG28093ProteinID:KXG28093.1
PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF50SMART:SM00248EnsemblPlantsGene:SORBI_3005G084000SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI00081AD5A3
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:+:11354335..11360387
Molecular Weight (calculated)
101892.0 Da
IEP (calculated)
7.489
GRAVY (calculated)
0.074
Length
934 amino acids
Sequence
(BLAST)
001: MAQPQSRQEQ SATPMDRRLL AAATTGDTIA MQHLASHDPA VLLGTTPQRN TCLHISCIYG HEGFCKDVLT LNQCLPLLAA TNADDETPLL AAVARGRAKL
101: ASILLRFYCD QHLRDTILMQ DKRGFNALQH AIFRGLRKLA LELIEAEPAL SKSVNKWYGS PMFTTVMIDN GDVFEKLLEI HDAADGGARR YNALHAAVTT
201: GNAVMAKRIM EARPLLVRQE NDDKRTPMYL AAKENKIEVL RVLLEHDPSL GYFTSTDGSP LLCIAATDGH VGVARELLRH CPDPPYCDTT GSTCFHIAVT
301: SGLADFVRFV VRSPQLQHLV NLPDNKGEPA LLLAHRIMAA GDEPKRKTMM SVITILQCYN NNNLSVHAEP FTSGMERLVK AAVCGHVAEM RNLYLHVPDV
401: LVRTTPQGNT CLHIAAIHGH KVFCKEVQAL KPSLLAAVNS DGETPLLAAV ASGRVSVASV LLRCCGDRQL SNTILKQDKR GCSALHHAIR SGHRELALEL
501: IEAEPALSQA VNEYGESPMF IAVMRNYEDV FNKLLQIPDS ALGGACGMNA LHVAVRNGNS DIATKIMKTV PALAREEDTV TKTPVHLAAL YDKIDVLGVL
601: LEHDPSLGYL VTGDGFPLLS LAGFRGHVGI ARELLKHCPD APSTSVSGWT YLHTAVSYQQ TEFVDFVLGL PQSGRLVNMR TKDGDTALHL AVQKCNPKMV
701: AALLLHPGID VTVLNNNGNP ANWALPKHLA KTLNWNEVSM LTVKADPQDA GSILNLHMDA KDEVTDSSRK DIKTLTQTYT GNTSLVAILI ATITFAAAFT
801: LPGGYSTDAG NEGLPIMARK IAFKAFLISD ALAMCSSLAV AFICVIARWE DLEFLLYYRS FSKKLMWFAY MATTTAFATG LYTVLAPQLP GLAVAICVLT
901: SLLPILTKLL GEWPILRLRF RLGQTYNSEL LKML
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.