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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 4
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021662_P002 Maize plastid 94.85 90.86
TraesCS2A01G219300.4 Wheat plastid 81.97 83.1
TraesCS2B01G244900.5 Wheat plastid 81.52 82.64
TraesCS2D01G224000.2 Wheat plastid 81.36 82.24
HORVU2Hr1G045370.3 Barley plastid 63.79 68.57
KXG36379 Sorghum cytosol 23.64 39.1
KXG36384 Sorghum cytosol 21.67 35.84
EES18294 Sorghum plasma membrane 34.55 32.62
OQU84849 Sorghum plasma membrane 29.24 30.3
OQU78058 Sorghum plasma membrane 28.18 29.71
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 28.03 29.51
OQU80298 Sorghum mitochondrion, plastid 31.06 29.5
VIT_14s0081g00350.t01 Wine grape cytosol 23.03 28.46
PGSC0003DMT400071072 Potato cytosol 15.76 28.11
OQU89270 Sorghum cytosol 23.79 27.94
EER90917 Sorghum cytosol, peroxisome, plasma membrane 22.58 26.8
OQU83139 Sorghum cytosol 9.09 26.79
OQU83144 Sorghum cytosol 16.21 26.62
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 23.03 26.39
EER90916 Sorghum cytosol 22.58 26.37
VIT_05s0165g00010.t01 Wine grape nucleus 18.33 26.25
KXG27928 Sorghum plasma membrane 26.36 26.2
VIT_12s0059g00110.t01 Wine grape cytosol 15.3 26.1
VIT_12s0059g00130.t01 Wine grape cytosol 15.0 25.98
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 24.24 25.93
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 26.36 25.74
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 20.3 25.62
VIT_12s0059g00150.t01 Wine grape cytosol 15.0 25.58
CDY45914 Canola cytosol 16.97 25.51
VIT_05s0124g00670.t01 Wine grape cytosol 22.27 25.39
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 15.45 25.19
EER87702 Sorghum nucleus 27.88 25.0
VIT_12s0059g00060.t01 Wine grape cytosol 19.39 24.9
VIT_05s0165g00060.t01 Wine grape cytosol 9.55 24.8
VIT_05s0124g00720.t01 Wine grape cytosol 14.24 24.74
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 19.24 24.71
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 23.03 24.68
EER88274 Sorghum cytosol 28.18 24.54
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 21.82 24.53
VIT_12s0028g03960.t01 Wine grape plasma membrane 15.45 24.52
Solyc07g061750.2.1 Tomato cytosol 21.52 24.48
OQU84108 Sorghum cytosol, nucleus, plasma membrane 28.18 24.44
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 22.58 24.35
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 23.33 24.33
Bra023774.1-P Field mustard plasma membrane 22.42 24.26
VIT_05s0165g00140.t01 Wine grape cytosol 17.12 24.25
VIT_05s0102g00030.t01 Wine grape cytosol 21.67 24.24
VIT_19s0014g05330.t01 Wine grape extracellular 21.21 24.18
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 18.94 24.18
VIT_05s0102g00050.t01 Wine grape nucleus 21.97 24.13
VIT_05s0165g00290.t01 Wine grape cytosol 21.97 24.13
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 23.79 24.01
VIT_12s0059g00090.t01 Wine grape cytosol 13.03 23.96
VIT_12s0028g04020.t01 Wine grape plasma membrane 11.52 23.9
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 21.36 23.74
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 20.91 23.71
VIT_13s0047g01220.t01 Wine grape plasma membrane 22.27 23.71
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 23.18 23.47
EER96593 Sorghum plasma membrane 17.12 23.35
VIT_05s0124g00460.t01 Wine grape cytosol 9.55 23.33
VIT_05s0029g01490.t01 Wine grape cytosol 16.82 23.32
AT4G03460.1 Thale cress peroxisome 22.12 23.25
EER87700 Sorghum cytosol 28.33 23.2
Bra033416.1-P Field mustard cytosol 19.7 23.17
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 23.33 23.12
VIT_14s0081g00390.t01 Wine grape cytosol 17.88 23.0
VIT_12s0059g00050.t01 Wine grape plasma membrane 22.42 22.87
EER89595 Sorghum cytosol 13.03 22.75
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 18.79 22.55
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 22.73 22.49
Bra034209.1-P Field mustard cytosol 21.21 22.44
VIT_14s0081g00360.t01 Wine grape cytosol 14.24 22.38
VIT_14s0081g00420.t01 Wine grape cytosol 20.15 22.35
OQU83143 Sorghum cytosol 11.82 22.35
VIT_05s0029g01540.t01 Wine grape plasma membrane 22.58 22.34
VIT_12s0028g03990.t01 Wine grape cytosol 19.85 22.09
OQU83151 Sorghum cytosol 4.85 21.92
VIT_05s0029g01420.t01 Wine grape cytosol 21.67 21.8
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 22.27 21.71
AT4G03450.1 Thale cress plasma membrane 21.06 21.68
EES07299 Sorghum cytosol, plasma membrane 17.12 21.36
Bra000823.1-P Field mustard plasma membrane 14.24 21.17
AT4G03480.1 Thale cress mitochondrion 21.06 21.09
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 22.27 21.03
EES15259 Sorghum cytosol 17.88 21.0
EER95066 Sorghum cytosol 18.03 20.99
AT4G05040.1 Thale cress cytosol 18.18 20.98
EER97054 Sorghum cytosol 17.73 20.82
VIT_12s0028g04010.t01 Wine grape cytosol 14.09 20.76
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 4.85 20.65
EES03848 Sorghum cytosol 17.27 20.5
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 22.12 20.36
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 21.52 20.14
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 20.0 19.7
VIT_14s0081g00370.t01 Wine grape cytosol 10.15 19.65
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 20.0 19.33
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 20.76 19.3
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 22.27 19.14
AT4G03440.1 Thale cress cytosol 21.36 18.77
AT4G14390.1 Thale cress plasma membrane 19.39 18.44
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 22.88 18.35
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 22.73 16.93
EER95067 Sorghum cytosol, nucleus, plasma membrane 17.12 16.42
VIT_12s0059g00120.t01 Wine grape cytosol 19.09 15.27
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 20.0 14.13
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:8084060InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
UniProt:C5XA51EnsemblPlants:EER97319ProteinID:EER97319ProteinID:EER97319.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796
PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF58SMART:SM00248EnsemblPlantsGene:SORBI_3002G323300SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0001A835BD
RefSeq:XP_002460798.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:69450101..69454324
Molecular Weight (calculated)
70756.2 Da
IEP (calculated)
8.932
GRAVY (calculated)
0.230
Length
660 amino acids
Sequence
(BLAST)
001: MASPEAAETS PPSTPTTSAS PCPTPRPLAT APPTMGATLL RAARSGDERR LVKALLADPA APDLETAATA GGNTLLHVAA VGGHADLASL LLRRAPRLLA
101: ARNAALDTPL HLAARAGAHK VVALLVASSS SSSPACSLRG LTRATNRRGE TALHDAVRGG HEAAARALAA ADPGLVELCG GAGESPFYMA AAAGSLGMVR
201: LLLKTYRDAD EEEEVAGLGS SMGPGGRTVM HAAVLTSNEM IRELLQWNPT LVKEVDDSGS TPFHYIASVG NISAMKLLLR RDSSVAYSSD SNGLFPVHIA
301: AKMGYGQFIY ELCRFCPDCD ELLDNRGRNF LHIAIEHKKW KVVWCFSGTE DLGRMANVMD SEGNTPLHLA VKNADQMIVS LLMATKGVLP NIVNNQGLTA
401: LDLAVLATDK GISYTLNPQV IILRCLAWTG AVLSPRRLDH FIDEFGIGKT SGNELKKFTN IAQNLIVGSV LVSTVTFAAV FTLPGGYISD GHPHAGAPIL
501: SHRYTFKAFV MANTLAFVGS TLSTIWLTYA GSEHVHPLLR AIYMFLSVIS MEQATRSMVI GFALGAYVVL SPVSERIAIV VCMSTFMTLL LRNPSSWQLW
601: FLFMPIKRRL GWKGAFKTHL PLETRSRLTI GVGSNFACQF LRRMLGMLFT YSFIFLLALL
Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)
001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.