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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG27928 Sorghum plasma membrane 60.95 62.05
HORVU1Hr1G017320.2 Barley cytosol 23.22 53.04
Os11t0182900-00 Rice plastid 36.09 52.81
TraesCS5B01G439300.1 Wheat cytosol, peroxisome, plasma membrane 46.89 51.21
TraesCS5A01G436200.1 Wheat plasma membrane 48.22 50.78
HORVU5Hr1G084850.1 Barley cytosol 27.37 50.68
TraesCS5B01G336900.1 Wheat cytosol 47.04 49.84
TraesCS4A01G434700.1 Wheat plasma membrane 47.49 49.69
TraesCS7D01G043800.1 Wheat plastid 33.28 49.23
HORVU7Hr1G008610.5 Barley cytosol, plastid 39.2 49.07
TraesCS5D01G443900.1 Wheat mitochondrion 48.96 49.04
HORVU0Hr1G030080.2 Barley plasma membrane 46.3 48.68
TraesCS5D01G343400.1 Wheat cytosol 46.6 48.61
TraesCS5A01G338100.1 Wheat cytosol 35.06 48.57
TraesCS5A01G339200.1 Wheat plasma membrane 46.6 48.46
HORVU3Hr1G017090.2 Barley cytosol 46.15 47.85
TraesCS5B01G337600.1 Wheat plasma membrane 46.45 47.29
TraesCS5D01G342600.1 Wheat cytosol 46.75 45.86
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 41.42 42.81
EER96593 Sorghum plasma membrane 24.85 34.71
GSMUA_Achr9P02700_001 Banana cytosol 18.93 33.25
GSMUA_Achr9P02720_001 Banana cytosol 18.93 32.9
KXG36379 Sorghum cytosol 19.23 32.58
KXG36384 Sorghum cytosol 17.6 29.82
GSMUA_Achr7P12630_001 Banana cytosol 27.07 28.11
OQU83144 Sorghum cytosol 16.72 28.11
PGSC0003DMT400071072 Potato cytosol 15.24 27.84
GSMUA_Achr9P02690_001 Banana plasma membrane 23.52 27.6
GSMUA_Achr9P02740_001 Banana cytosol 23.96 27.6
VIT_05s0124g00720.t01 Wine grape cytosol 15.09 26.84
OQU89270 Sorghum cytosol 22.04 26.51
VIT_05s0165g00060.t01 Wine grape cytosol 9.91 26.38
EER97319 Sorghum plastid 25.74 26.36
OQU80298 Sorghum mitochondrion, plastid 26.92 26.19
OQU83151 Sorghum cytosol 5.62 26.03
EES18294 Sorghum plasma membrane 26.78 25.89
EER90917 Sorghum cytosol, peroxisome, plasma membrane 21.01 25.54
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 23.67 25.52
VIT_14s0081g00350.t01 Wine grape cytosol 20.12 25.47
VIT_12s0059g00060.t01 Wine grape cytosol 19.23 25.29
VIT_05s0124g00670.t01 Wine grape cytosol 21.6 25.22
VIT_05s0165g00010.t01 Wine grape nucleus 17.16 25.16
VIT_19s0014g05330.t01 Wine grape extracellular 20.86 24.35
AT4G05040.1 Thale cress cytosol 20.56 24.3
VIT_05s0102g00050.t01 Wine grape nucleus 21.45 24.13
OQU78058 Sorghum plasma membrane 22.34 24.12
VIT_05s0165g00140.t01 Wine grape cytosol 16.57 24.03
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 18.49 23.9
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 23.52 23.87
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 21.75 23.86
VIT_05s0165g00290.t01 Wine grape cytosol 21.15 23.79
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 20.86 23.74
EER90916 Sorghum cytosol 19.82 23.72
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 22.19 23.7
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 20.56 23.68
OQU83139 Sorghum cytosol 7.84 23.66
VIT_12s0059g00130.t01 Wine grape cytosol 13.31 23.62
Solyc07g061750.2.1 Tomato cytosol 20.27 23.62
VIT_05s0102g00030.t01 Wine grape cytosol 20.56 23.56
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.5 23.56
OQU84849 Sorghum plasma membrane 22.19 23.55
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 21.3 23.53
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 19.97 23.44
VIT_12s0059g00150.t01 Wine grape cytosol 13.17 23.0
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 19.67 22.85
VIT_14s0081g00390.t01 Wine grape cytosol 17.31 22.81
AT4G03460.1 Thale cress peroxisome 21.15 22.77
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 17.31 22.76
EER89595 Sorghum cytosol 12.72 22.75
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 21.89 22.7
OQU83143 Sorghum cytosol 11.69 22.64
VIT_12s0059g00110.t01 Wine grape cytosol 12.87 22.48
Bra034209.1-P Field mustard cytosol 20.71 22.44
EER87702 Sorghum nucleus 24.41 22.42
OQU84108 Sorghum cytosol, nucleus, plasma membrane 25.15 22.34
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 22.04 22.34
Bra023774.1-P Field mustard plasma membrane 20.12 22.3
VIT_12s0059g00050.t01 Wine grape plasma membrane 21.3 22.26
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 17.01 22.24
VIT_14s0081g00420.t01 Wine grape cytosol 19.53 22.18
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 22.19 22.16
EES15259 Sorghum cytosol 18.34 22.06
VIT_12s0059g00090.t01 Wine grape cytosol 11.69 22.01
VIT_13s0047g01220.t01 Wine grape plasma membrane 20.12 21.94
EES07299 Sorghum cytosol, plasma membrane 17.16 21.93
VIT_05s0124g00460.t01 Wine grape cytosol 8.73 21.85
EER88274 Sorghum cytosol 24.41 21.77
VIT_12s0028g03990.t01 Wine grape cytosol 19.08 21.75
Bra033416.1-P Field mustard cytosol 18.05 21.75
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 19.82 21.72
EER95066 Sorghum cytosol 18.2 21.69
AT4G03450.1 Thale cress plasma membrane 20.56 21.68
EER97054 Sorghum cytosol 17.9 21.53
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 12.87 21.48
VIT_12s0028g04010.t01 Wine grape cytosol 14.2 21.43
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 21.15 21.34
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 17.31 21.27
VIT_05s0029g01540.t01 Wine grape plasma membrane 20.86 21.14
AT4G03480.1 Thale cress mitochondrion 20.56 21.09
EES03848 Sorghum cytosol 17.31 21.04
VIT_05s0029g01420.t01 Wine grape cytosol 20.41 21.04
Bra000823.1-P Field mustard plasma membrane 13.61 20.72
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 21.45 20.57
VIT_14s0081g00370.t01 Wine grape cytosol 10.36 20.53
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 21.75 20.5
EER87700 Sorghum cytosol 24.41 20.47
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 20.56 20.35
VIT_14s0081g00360.t01 Wine grape cytosol 12.57 20.24
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 20.86 20.17
VIT_05s0029g01490.t01 Wine grape cytosol 14.2 20.17
VIT_12s0028g04020.t01 Wine grape plasma membrane 9.47 20.13
AT4G14390.1 Thale cress plasma membrane 20.41 19.88
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 20.56 19.58
AT4G03440.1 Thale cress cytosol 21.45 19.31
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 20.12 17.71
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 21.45 17.62
EER95067 Sorghum cytosol, nucleus, plasma membrane 17.6 17.3
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 21.6 16.48
VIT_12s0059g00120.t01 Wine grape cytosol 18.34 15.03
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 18.49 13.38
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1Z5RHD8InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU83029ProteinID:OQU83029ProteinID:OQU83029.1
PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF116SMART:SM00248EnsemblPlantsGene:SORBI_3005G063800SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI000B8B9DC4SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:6990133..6993153
Molecular Weight (calculated)
71650.6 Da
IEP (calculated)
9.124
GRAVY (calculated)
0.184
Length
676 amino acids
Sequence
(BLAST)
001: MDHRRQHQHC VQLACPPGDS PATKPMMRHP KDDAAHLFIS MCPSLYRAVY RGRTEEVMEL LLRQKGAARD GKAAAGVSGI RHGQCDILEV SAESNTVLHV
101: AAEQGHDKLI QELYHRFTEH GLLLSHRNSA LDTPLHCAAR AGHVMAVAVL VKLSRGSGES ILGCRNQAGD TALHLAARHG HHVVVAALVS AAAGPAADLN
201: NAGVSPLYLA VMSGSVQAVK AITKCKDASS AGPSSQNALH AAVFQSSEMV DVLLGWRPAL ADQVDSSGSS PLHFASSAGD RSVVHAILRA APPSTVYKKD
301: SSGLSALHVA ARMGHHRVAK EMLRMYPDAG ELRDGDGGTF LHTACREKQA SVVSSVAIKS RRLRGLLLDA RDGGGNTALH LAVAAGAPGV VEDLLRKGGA
401: RADVVNDDGD TPFDLLAAAS TTSSFTMVRL VVTLVAYGAQ LGSTRRQDQL APWSGRDVVQ GVERTSDSLA VVAVLIAASA FAAGFNVPGG YDSGGTGRAL
501: LEGKSPAFGT FLFLDMFAVA TSVVAVILLV YGKTSRSAVA SFTSFAWALQ CMWVSLMTLM LAFYVALAIT SAVSRYGLMA IETCIFALQM CVTTWIMPAK
601: SWSTIWRFIV RQRISHDKGK NVIIKRQYPL AGAFVLHFCL FTVITNIAGL IFWVTTDGRQ GTGTPVVLSP TPSPVV
Best Arabidopsis Sequence Match ( AT4G03490.4 )
(BLAST)
001: MDPETYRAVV MGKVQEFEKV MEENEIPVLD QVTFQGNTIL HLAAIYGHDH LVRRILAYEL NILRNWKRGL NCNFVPSFSH YQTLLVRRNY KGDLALHVAA
101: AAGHKLIVGL LIDCLRQLPQ DITMVIGSEQ MVIGNIFRVS NNDGNTALHL SLKGNHVSVS LQLVREDRST CFLLDKEDVS PLYMAAEAGY VSLVEHMLRG
201: LDASFVGKSV LCAAVKSQNL DILTAVLESD SDLVESRDED GRTPLATAAS IGYDIGVQHM LTRFASSTQV AYIKNEDGSF PIHSACSARC TSALKVILKH
301: HPDTIEMLNS QGQNVLHVAA KSGNARAVGY LLRKSDVKRL INEQDIEGNT PLHLASSNSH PKVVSLFIHD RRVDLKILNY KGFTALDAAE DHMATIPSLQ
401: EWLIWMALVA AGTTRAPRVH LRADIPGLTT DEDLILKIHK DRVNTLLVVA TLVATMAFAA GLSVPLGYNS TEFKSNVKHS YEESAFHAFV ICNSIAVYTA
501: VISTVALIGT QLADLKCMLT TFKFIVPLLG FSIIAMSLAF VAGLYLVLGH HYWLAIFVLA SGGFYLMALL LLIIPYASPY TFSPLFFRYF LRFPFSMLVS
601: FAYWRDGTDG ECSSRVFRWS FLG
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G03490]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.