Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G178000.1 Wheat cytosol 20.24 55.2
TraesCS6A01G412600.1 Wheat plastid 29.43 54.77
TraesCS6B01G461800.1 Wheat cytosol 50.07 54.12
TraesCS6B01G460200.1 Wheat cytosol 28.78 52.39
TraesCS4A01G427100.1 Wheat plasma membrane 41.0 52.35
TraesCS7A01G061700.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 20.37 51.49
TraesCS6D01G395500.1 Wheat plasma membrane, plastid 45.86 50.51
HORVU3Hr1G086490.1 Barley cytosol 48.36 50.07
TraesCS3A01G358000.2 Wheat cytosol 47.96 50.0
TraesCS6D01G394900.2 Wheat cytosol 44.55 49.93
TraesCS6A01G412200.1 Wheat cytosol 28.65 49.89
TraesCS6B01G460800.1 Wheat plasma membrane 41.66 49.76
HORVU6Hr1G093780.3 Barley plastid 33.11 49.51
TraesCS6D01G395200.1 Wheat plasma membrane 47.17 49.11
TraesCS3B01G391000.2 Wheat cytosol 46.91 49.04
OQU89270 Sorghum cytosol 36.14 48.93
TraesCS3D01G352000.1 Wheat cytosol 47.17 48.84
TraesCS6B01G460400.1 Wheat plasma membrane 46.78 48.83
TraesCS6A01G412500.2 Wheat plasma membrane 39.95 47.95
Os09t0322500-01 Rice plasma membrane 44.55 47.41
TraesCS6D01G396100.2 Wheat cytosol, peroxisome, plasma membrane 46.25 47.25
TraesCSU01G089400.1 Wheat cytosol, peroxisome, plasma membrane 45.86 46.85
TraesCS6B01G448200.1 Wheat nucleus, peroxisome, plasma membrane 43.76 46.57
TraesCS7A01G061800.1 Wheat cytosol 14.59 46.06
TraesCS6D01G395300.1 Wheat plastid 39.55 45.13
TraesCSU01G089100.1 Wheat plasma membrane, plastid 39.03 44.53
TraesCSU01G089300.1 Wheat plasma membrane 24.84 44.47
TraesCSU01G088900.1 Wheat plasma membrane 24.18 43.4
OQU80298 Sorghum mitochondrion, plastid 37.06 40.58
OQU84849 Sorghum plasma membrane 31.41 37.52
TraesCS6B01G460500.1 Wheat plasma membrane, plastid 42.97 36.7
EER88274 Sorghum cytosol 32.98 33.11
KXG36379 Sorghum cytosol 16.95 32.33
EER87702 Sorghum nucleus 29.83 30.84
KXG36384 Sorghum cytosol 16.16 30.83
EER87700 Sorghum cytosol 31.67 29.9
OQU78058 Sorghum plasma membrane 24.44 29.71
VIT_14s0081g00350.t01 Wine grape cytosol 20.63 29.4
EES18294 Sorghum plasma membrane 26.02 28.33
EER97319 Sorghum plastid 24.44 28.18
OQU83144 Sorghum cytosol 14.85 28.11
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 22.86 27.75
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 22.34 27.55
OQU83139 Sorghum cytosol 7.88 26.79
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 20.89 26.77
KXG27928 Sorghum plasma membrane 23.26 26.66
VIT_05s0124g00720.t01 Wine grape cytosol 12.88 25.79
VIT_12s0059g00110.t01 Wine grape cytosol 13.01 25.58
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 21.81 25.38
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 19.05 25.17
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 22.34 25.15
VIT_12s0059g00150.t01 Wine grape cytosol 12.75 25.06
VIT_05s0124g00670.t01 Wine grape cytosol 19.05 25.04
EER90917 Sorghum cytosol, peroxisome, plasma membrane 18.27 25.0
VIT_12s0059g00130.t01 Wine grape cytosol 12.48 24.93
PGSC0003DMT400071072 Potato cytosol 12.09 24.86
VIT_05s0165g00060.t01 Wine grape cytosol 8.28 24.8
EER89595 Sorghum cytosol 12.22 24.6
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 17.74 24.55
VIT_05s0165g00010.t01 Wine grape nucleus 14.85 24.51
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 16.82 24.47
VIT_19s0014g05330.t01 Wine grape extracellular 18.53 24.35
VIT_05s0029g01490.t01 Wine grape cytosol 15.11 24.16
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 16.29 24.12
VIT_12s0059g00060.t01 Wine grape cytosol 16.29 24.12
VIT_05s0102g00050.t01 Wine grape nucleus 18.79 23.79
Bra023774.1-P Field mustard plasma membrane 19.05 23.77
VIT_05s0102g00030.t01 Wine grape cytosol 18.4 23.73
VIT_05s0124g00460.t01 Wine grape cytosol 8.41 23.7
VIT_12s0059g00090.t01 Wine grape cytosol 11.17 23.68
VIT_05s0165g00290.t01 Wine grape cytosol 18.66 23.63
VIT_05s0165g00140.t01 Wine grape cytosol 14.45 23.61
Solyc07g061750.2.1 Tomato cytosol 17.87 23.45
EES07299 Sorghum cytosol, plasma membrane 16.29 23.44
EER90916 Sorghum cytosol 17.21 23.19
VIT_05s0029g01420.t01 Wine grape cytosol 19.97 23.17
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 19.19 23.06
VIT_13s0047g01220.t01 Wine grape plasma membrane 18.79 23.06
VIT_14s0081g00390.t01 Wine grape cytosol 15.51 23.0
VIT_05s0029g01540.t01 Wine grape plasma membrane 20.11 22.94
EER96593 Sorghum plasma membrane 14.59 22.93
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 17.48 22.85
VIT_12s0028g03960.t01 Wine grape plasma membrane 12.48 22.84
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 19.97 22.79
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 18.27 22.71
VIT_14s0081g00420.t01 Wine grape cytosol 17.74 22.69
OQU83151 Sorghum cytosol 4.34 22.6
VIT_12s0059g00050.t01 Wine grape plasma membrane 19.19 22.57
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 18.92 22.09
EER97054 Sorghum cytosol 16.29 22.06
EES15259 Sorghum cytosol 16.29 22.06
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 20.11 21.89
EER95066 Sorghum cytosol 16.29 21.87
OQU83143 Sorghum cytosol 9.99 21.78
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 19.32 21.71
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 14.72 21.66
AT4G03460.1 Thale cress peroxisome 17.87 21.66
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 16.69 21.64
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 17.48 21.59
VIT_12s0028g04020.t01 Wine grape plasma membrane 8.94 21.38
Bra034209.1-P Field mustard cytosol 17.48 21.31
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 11.3 21.23
VIT_14s0081g00360.t01 Wine grape cytosol 11.56 20.95
Bra000823.1-P Field mustard plasma membrane 12.22 20.95
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 18.27 20.87
EES03848 Sorghum cytosol 15.24 20.86
VIT_14s0081g00370.t01 Wine grape cytosol 9.33 20.82
VIT_12s0028g03990.t01 Wine grape cytosol 16.16 20.74
AT4G05040.1 Thale cress cytosol 15.24 20.28
Bra033416.1-P Field mustard cytosol 14.59 19.79
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 19.84 19.66
AT4G03450.1 Thale cress plasma membrane 16.56 19.66
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 17.87 19.29
VIT_12s0028g04010.t01 Wine grape cytosol 11.3 19.2
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 17.21 19.18
AT4G03480.1 Thale cress mitochondrion 16.16 18.66
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 17.21 18.45
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 16.03 18.21
EER95067 Sorghum cytosol, nucleus, plasma membrane 16.43 18.17
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 16.95 17.99
AT4G14390.1 Thale cress plasma membrane 16.29 17.87
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 19.19 17.74
KRH33072 Soybean cytosol 5.39 17.67
AT4G03440.1 Thale cress cytosol 16.82 17.04
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 18.79 16.14
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 19.45 15.85
VIT_12s0059g00120.t01 Wine grape cytosol 16.29 15.03
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1Z5RK47InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU84108ProteinID:OQU84108ProteinID:OQU84108.1
ProteinID:OQU84109.1ProteinID:OQU84110.1PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_dom
PFscan:PS50088PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF112SMART:SM00248EnsemblPlantsGene:SORBI_3005G229800
SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI000B4245ADSEG:seg::
Description
hypothetical protein
Coordinates
chr5:-:71671377..71676047
Molecular Weight (calculated)
83299.9 Da
IEP (calculated)
7.923
GRAVY (calculated)
-0.140
Length
761 amino acids
Sequence
(BLAST)
001: MSSSNGAEDS PSETNALVEA MDAKLMMATG TGDVQQLKHL VHRQEQDSNM MVVVMAKQTA SVEKPCPQQR NMDPHLLALA SSGSSEELQT LLNGENSQAT
101: GHGTDGSLTT LRASSYGGDT EANESILAWM TAQGDTALHV VAACSQGNNL FTRFREAKHI LVEQNNKKRH PTRAERHAMT TYGDGDNFLE STRIIYGKAK
201: HLLFVQNNKG DTPLHCAARA GKSNMVACLI DLASSEGENR IKELLRKENK HKETALHEAV RVGNKDIVDL LMWKDSELAN FPEDGGTSPM YLAILLKWDE
301: IVKTLYDKSS HGKLSFSGPN GQNALHAAVL RHQAQDLAKL LKWNETHLCP QNKDLTTQRD ETGSTPLHFA AAVKFLFRPS NICRQVLEAN PDALYQPDHA
401: GVFPIHVAAS AGASWNVDMF VKRCPGSAGL CDAKGKTFLH VAVEKKEANV IRSVCRNLSL SWIMNMVDND GNTALHLAVE AGSLQMFCPL LANPQVNLNL
501: PNSRGETPLD IAQYKIPEDG FYHALNSEVQ ICHTLRIASA VNGVRRHGHL KDNKTVRVKH DESKEMEAVK DSTGSLCIGS VLIATVTFGV TFAVPGGYVA
601: DDRNNGGTPI HARRYAFDAF IASNTLAFVL STMATLGVMH SGSSLLSLQR RKMHIFIAIY LVSNSITSLT AAFALGAYVV LAPVAQKSAI ATCVLSSLVL
701: LYMNMEFIWR RLLLLPPLRT RKGLIWAWSY SAYVIAASML SGYWPLIFIF GWAAYTNQSI T
Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)
001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.