Factsheet for TraesCS3D01G352000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G358000.2	Wheat	cytosol	94.83	95.48
TraesCS3D01G352300.1	Wheat	cytosol	42.86	94.31
TraesCS3B01G391000.2	Wheat	cytosol	93.06	93.96
HORVU3Hr1G086490.1	Barley	cytosol	93.47	93.47
Os09t0322500-01	Rice	plasma membrane	51.84	53.29
TraesCS1D01G025500.1	Wheat	cytosol, peroxisome, plasma membrane	28.57	50.12
TraesCS6D01G395500.1	Wheat	plasma membrane, plastid	46.39	49.35
TraesCS6D01G395200.1	Wheat	plasma membrane	48.03	48.29
OQU84108	Sorghum	cytosol, nucleus, plasma membrane	48.84	47.17
TraesCS6D01G396100.2	Wheat	cytosol, peroxisome, plasma membrane	47.35	46.71
TraesCS1D01G025800.1	Wheat	golgi, plasma membrane, vacuole	11.84	46.28
TraesCS6D01G394900.2	Wheat	cytosol	42.59	46.1
TraesCS1D01G025900.1	Wheat	plasma membrane	18.5	45.64
TraesCS1D01G025700.1	Wheat	plasma membrane	42.72	43.67
TraesCS6D01G395300.1	Wheat	plastid	38.78	42.73
TraesCS5D01G357200.1	Wheat	cytosol	42.86	40.7
TraesCS5D01G190200.1	Wheat	cytosol, peroxisome, plasma membrane	36.73	40.3
TraesCS5D01G206000.1	Wheat	cytosol, peroxisome, plasma membrane	33.33	36.46
TraesCS4D01G352600.1	Wheat	plasma membrane	32.52	36.27
TraesCS1D01G011300.1	Wheat	cytosol, peroxisome, plasma membrane	32.65	33.76
TraesCS3D01G515100.1	Wheat	cytosol, peroxisome, plasma membrane	29.52	33.59
TraesCS7D01G019300.1	Wheat	cytosol, peroxisome, plasma membrane	30.48	33.33
TraesCS1D01G045000.1	Wheat	cytosol, peroxisome, plasma membrane	30.07	32.36
TraesCS5D01G026900.1	Wheat	plastid	31.16	28.59
TraesCS2D01G224000.2	Wheat	plastid	25.31	28.48
TraesCS5D01G343400.1	Wheat	cytosol	24.76	28.09
TraesCS3D01G042100.1	Wheat	cytosol, peroxisome, plasma membrane	23.81	27.56
TraesCS7D01G043800.1	Wheat	plastid	17.01	27.35
TraesCS4D01G326300.1	Wheat	cytosol	23.27	27.14
TraesCS5D01G443900.1	Wheat	mitochondrion	24.76	26.96
VIT_14s0081g00350.t01	Wine grape	cytosol	19.18	26.4
PGSC0003DMT400071072	Potato	cytosol	13.2	26.22
TraesCS5D01G342600.1	Wheat	cytosol	24.49	26.12
TraesCS7D01G034400.1	Wheat	cytosol, peroxisome, plasma membrane	20.14	25.96
VIT_05s0124g00720.t01	Wine grape	cytosol	13.06	25.26
VIT_05s0124g00670.t01	Wine grape	cytosol	19.46	24.7
VIT_05s0165g00010.t01	Wine grape	nucleus	15.37	24.51
VIT_05s0165g00060.t01	Wine grape	cytosol	8.44	24.41
VIT_12s0059g00110.t01	Wine grape	cytosol	12.79	24.29
VIT_12s0059g00150.t01	Wine grape	cytosol	12.65	24.03
VIT_19s0014g05330.t01	Wine grape	extracellular	18.91	24.01
VIT_05s0029g01490.t01	Wine grape	cytosol	15.37	23.74
TraesCS7D01G410500.1	Wheat	cytosol	18.37	23.68
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.5	23.61
TraesCS1D01G379500.2	Wheat	cytosol	18.78	23.59
TraesCS3D01G533500.1	Wheat	cytosol	18.78	23.39
VIT_12s0059g00130.t01	Wine grape	cytosol	12.11	23.36
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.0	23.22
VIT_05s0165g00140.t01	Wine grape	cytosol	14.69	23.18
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	16.46	23.14
Bra023774.1-P	Field mustard	plasma membrane	19.18	23.11
VIT_12s0059g00060.t01	Wine grape	cytosol	16.05	22.96
Solyc07g061750.2.1	Tomato	cytosol	18.1	22.93
VIT_13s0047g01220.t01	Wine grape	plasma membrane	19.32	22.9
VIT_05s0102g00050.t01	Wine grape	nucleus	18.64	22.8
TraesCS4D01G203200.1	Wheat	cytosol	16.73	22.78
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	15.92	22.76
TraesCS3D01G535100.1	Wheat	cytosol, peroxisome, plasma membrane	10.48	22.71
VIT_05s0102g00030.t01	Wine grape	cytosol	18.23	22.71
TraesCS3D01G345200.1	Wheat	cytosol, peroxisome, plasma membrane	17.82	22.7
VIT_12s0028g03960.t01	Wine grape	plasma membrane	12.79	22.6
VIT_05s0124g00460.t01	Wine grape	cytosol	8.3	22.59
VIT_05s0165g00290.t01	Wine grape	cytosol	18.37	22.46
VIT_05s0029g01420.t01	Wine grape	cytosol	20.0	22.41
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	17.69	22.34
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.5	22.22
VIT_14s0081g00420.t01	Wine grape	cytosol	17.96	22.18
TraesCS6D01G011400.1	Wheat	peroxisome	16.33	22.02
VIT_12s0059g00090.t01	Wine grape	cytosol	10.75	22.01
TraesCS3D01G534600.1	Wheat	plasma membrane	18.1	21.95
VIT_05s0029g01540.t01	Wine grape	plasma membrane	19.86	21.89
TraesCS3D01G455500.1	Wheat	cytosol	17.82	21.8
VIT_12s0059g00050.t01	Wine grape	plasma membrane	19.05	21.64
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	17.28	21.64
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	19.18	21.63
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	19.46	21.44
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	14.97	21.28
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	17.82	21.27
VIT_14s0081g00390.t01	Wine grape	cytosol	14.83	21.25
Bra034209.1-P	Field mustard	cytosol	17.96	21.15
Bra033416.1-P	Field mustard	cytosol	15.92	20.86
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.73	20.74
AT4G05040.1	Thale cress	cytosol	16.05	20.63
Bra000823.1-P	Field mustard	plasma membrane	12.38	20.5
VIT_12s0028g03990.t01	Wine grape	cytosol	16.46	20.4
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	18.78	20.38
AT4G03460.1	Thale cress	peroxisome	17.41	20.38
TraesCS3D01G348800.2	Wheat	cytosol	15.37	20.36
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.37	20.27
TraesCS7D01G268900.1	Wheat	cytosol	15.1	20.18
VIT_14s0081g00360.t01	Wine grape	cytosol	11.43	20.0
VIT_14s0081g00370.t01	Wine grape	cytosol	9.25	19.94
TraesCS5D01G312200.1	Wheat	cytosol	15.24	19.82
AT4G03450.1	Thale cress	plasma membrane	17.14	19.66
VIT_12s0028g04020.t01	Wine grape	plasma membrane	8.44	19.5
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.64	19.43
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	13.61	19.05
KRH33072	Soybean	cytosol	5.99	18.97
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	19.59	18.75
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.23	18.69
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	17.28	18.59
VIT_12s0028g04010.t01	Wine grape	cytosol	11.29	18.53
AT4G03480.1	Thale cress	mitochondrion	16.6	18.51
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	17.82	18.45
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	16.6	18.21
AT4G14390.1	Thale cress	plasma membrane	17.14	18.16
AT4G03440.1	Thale cress	cytosol	17.55	17.18
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	19.18	17.13
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	16.05	16.69
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	19.32	16.03
VIT_12s0059g00120.t01	Wine grape	cytosol	15.92	14.18
TraesCS1D01G079400.1	Wheat	cytosol	17.28	11.96

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13857	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF112	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G352000	EnsemblPlants:TraesCS3D01G352000.1
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:462860608..462864221

Molecular Weight (calculated)

79902.4 Da

IEP (calculated)

6.989

GRAVY (calculated)

0.091

Length

735 amino acids

Sequence
(BLAST)

001: MASRSSGDEP SSLLMEENAV QVSVDAKLTV AAGRGNCQQL KDLLSTEDSK TMLVVMAPSI QASTVKPLPE VMSPLLLSSA CSGAWQDLEF LLNRGHGQPH
101: PSMNSSTNIL DLLTAYGSHS CSGKGASMQK ASDDVEALLN LPSGSTVSLL DGVTIEGGTA LHVVATYGES DGFLRSADII HSKANHLLFA RNKNGDTPLH
201: CAARAGMSRM VCHLITLARG ENTGVNRVKE LLEIENILKE TALHQAVRIG NNDIVKLLME EHSELASFPK DGTSPLYLAI LLEEDIIVET LYNASHMKLS
301: YSGKNGQNAL HAAVLRGTEL TKKLLEWNSD LTTQRDENGS TPLHFAAALA QQSQRGSICW QVLEANSASL YQSDCNGLFP IHVAASVGES GTITMFLNKS
401: PSSAGLQDSM GRTFLHVAAE KRKVRIVSSA CRNRSLLWIL NIQDNDGNTA LHLAIQARSL RMFCALLGNR HTHLNLSNNI GQTPLDISLY GVSPGIFDDQ
501: ISEAKIHFAL TVVNARSGGS RRDHFEENYT RQLKYDETEQ LEKLKESTQT LCIGVALIAT ATFTVTFALP GGYKADEHIN GGTPTLAGRY AFDAFIIAST
601: FSFVLSVMAM VGLMYSGYSI LNPQTRRIYL IAALYFGSTS GTCFLATFAL GLYMVLARVA HKSAIAICVI SPLAVICKQM DLWLKWAVLA QPLCTRIGLT
701: RTLVMVTTRI LFSLLMEFWP IIVIFVWATY TSNQF

Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)

001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.