Factsheet for TraesCS4D01G326300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G042100.1	Wheat	cytosol, peroxisome, plasma membrane	72.22	71.65
Os11t0435100-00	Rice	plastid	19.84	67.57
Os11t0435300-00	Rice	cytosol, peroxisome	59.68	63.62
Os11t0434850-00	Rice	cytosol	38.89	60.64
Os11t0434400-00	Rice	extracellular	38.73	60.1
KXG28374	Sorghum	cytosol, peroxisome, plasma membrane	61.59	59.33
TraesCS5D01G343400.1	Wheat	cytosol	46.03	44.75
TraesCS7D01G043800.1	Wheat	plastid	31.43	43.33
TraesCS5D01G342600.1	Wheat	cytosol	45.71	41.8
TraesCS5D01G443900.1	Wheat	mitochondrion	44.13	41.19
TraesCS7D01G034400.1	Wheat	cytosol, peroxisome, plasma membrane	34.13	37.72
GSMUA_Achr9P02700_001	Banana	cytosol	20.48	33.51
GSMUA_Achr9P02720_001	Banana	cytosol	20.63	33.42
GSMUA_Achr9P02740_001	Banana	cytosol	27.62	29.64
GSMUA_Achr7P12630_001	Banana	cytosol	29.68	28.73
GSMUA_Achr9P02690_001	Banana	plasma membrane	25.56	27.95
PGSC0003DMT400071072	Potato	cytosol	15.87	27.03
TraesCS1D01G025500.1	Wheat	cytosol, peroxisome, plasma membrane	17.78	26.73
VIT_05s0165g00060.t01	Wine grape	cytosol	10.48	25.98
VIT_12s0059g00130.t01	Wine grape	cytosol	15.71	25.98
VIT_14s0081g00350.t01	Wine grape	cytosol	21.9	25.84
TraesCS4D01G352600.1	Wheat	plasma membrane	26.98	25.8
TraesCS5D01G190200.1	Wheat	cytosol, peroxisome, plasma membrane	27.3	25.67
TraesCS6D01G394900.2	Wheat	cytosol	27.46	25.48
VIT_05s0165g00010.t01	Wine grape	nucleus	18.41	25.16
VIT_12s0028g04020.t01	Wine grape	plasma membrane	12.7	25.16
TraesCS5D01G206000.1	Wheat	cytosol, peroxisome, plasma membrane	26.83	25.15
VIT_05s0124g00670.t01	Wine grape	cytosol	23.02	25.04
TraesCS1D01G025900.1	Wheat	plasma membrane	11.75	24.83
VIT_12s0059g00110.t01	Wine grape	cytosol	15.24	24.81
VIT_12s0059g00150.t01	Wine grape	cytosol	15.24	24.81
VIT_05s0124g00720.t01	Wine grape	cytosol	14.92	24.74
TraesCS2D01G224000.2	Wheat	plastid	25.56	24.66
VIT_12s0028g03960.t01	Wine grape	plasma membrane	16.19	24.52
VIT_12s0059g00060.t01	Wine grape	cytosol	20.0	24.51
TraesCS6D01G395300.1	Wheat	plastid	25.71	24.29
TraesCS7D01G019300.1	Wheat	cytosol, peroxisome, plasma membrane	25.87	24.26
TraesCS4D01G203200.1	Wheat	cytosol	20.63	24.07
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.22	24.05
TraesCS6D01G395500.1	Wheat	plasma membrane, plastid	26.35	24.02
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.13	24.01
TraesCS1D01G025700.1	Wheat	plasma membrane	27.3	23.92
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	22.22	23.85
VIT_05s0102g00050.t01	Wine grape	nucleus	22.7	23.79
VIT_05s0165g00290.t01	Wine grape	cytosol	22.7	23.79
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.75	23.78
VIT_05s0102g00030.t01	Wine grape	cytosol	22.22	23.73
VIT_12s0059g00090.t01	Wine grape	cytosol	13.33	23.4
VIT_05s0165g00140.t01	Wine grape	cytosol	17.3	23.39
VIT_19s0014g05330.t01	Wine grape	extracellular	21.43	23.32
TraesCS1D01G045000.1	Wheat	cytosol, peroxisome, plasma membrane	25.24	23.28
TraesCS3D01G352000.1	Wheat	cytosol	27.14	23.27
TraesCS7D01G410500.1	Wheat	cytosol	20.95	23.16
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.89	23.15
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.29	22.97
TraesCS3D01G515100.1	Wheat	cytosol, peroxisome, plasma membrane	23.49	22.91
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	22.38	22.89
TraesCS6D01G396100.2	Wheat	cytosol, peroxisome, plasma membrane	26.98	22.82
TraesCS1D01G011300.1	Wheat	cytosol, peroxisome, plasma membrane	25.71	22.78
TraesCS6D01G395200.1	Wheat	plasma membrane	26.35	22.71
Bra033416.1-P	Field mustard	cytosol	20.16	22.64
Bra034209.1-P	Field mustard	cytosol	22.38	22.6
TraesCS6D01G011400.1	Wheat	peroxisome	19.52	22.57
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	18.73	22.56
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.9	22.55
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	18.41	22.44
AT4G05040.1	Thale cress	cytosol	20.32	22.38
TraesCS3D01G345200.1	Wheat	cytosol, peroxisome, plasma membrane	20.48	22.36
TraesCS1D01G025800.1	Wheat	golgi, plasma membrane, vacuole	6.67	22.34
TraesCS5D01G357200.1	Wheat	cytosol	27.3	22.22
VIT_05s0124g00460.t01	Wine grape	cytosol	9.52	22.22
Bra023774.1-P	Field mustard	plasma membrane	21.43	22.13
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	23.65	22.01
VIT_12s0028g03990.t01	Wine grape	cytosol	20.63	21.92
Solyc07g061750.2.1	Tomato	cytosol	20.16	21.9
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	23.17	21.89
Bra000823.1-P	Field mustard	plasma membrane	15.4	21.85
AT4G03450.1	Thale cress	plasma membrane	22.22	21.84
VIT_12s0059g00050.t01	Wine grape	plasma membrane	22.38	21.79
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	22.54	21.78
VIT_13s0047g01220.t01	Wine grape	plasma membrane	21.43	21.77
VIT_14s0081g00420.t01	Wine grape	cytosol	20.48	21.68
VIT_14s0081g00390.t01	Wine grape	cytosol	17.62	21.64
VIT_05s0029g01420.t01	Wine grape	cytosol	22.22	21.34
TraesCS3D01G352300.1	Wheat	cytosol	11.27	21.26
TraesCS7D01G268900.1	Wheat	cytosol	18.25	20.91
TraesCS3D01G533500.1	Wheat	cytosol	19.37	20.68
VIT_05s0029g01490.t01	Wine grape	cytosol	15.56	20.59
AT4G03460.1	Thale cress	peroxisome	20.48	20.54
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	23.33	20.5
VIT_14s0081g00360.t01	Wine grape	cytosol	13.65	20.48
TraesCS3D01G534600.1	Wheat	plasma membrane	19.68	20.46
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	21.75	20.45
VIT_05s0029g01540.t01	Wine grape	plasma membrane	21.59	20.39
TraesCS1D01G379500.2	Wheat	cytosol	18.89	20.34
VIT_12s0028g04010.t01	Wine grape	cytosol	14.29	20.09
AT4G14390.1	Thale cress	plasma membrane	22.06	20.03
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	22.54	20.0
TraesCS3D01G348800.2	Wheat	cytosol	17.62	20.0
TraesCS3D01G535100.1	Wheat	cytosol, peroxisome, plasma membrane	10.63	19.76
AT4G03480.1	Thale cress	mitochondrion	20.63	19.73
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	22.06	19.72
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.75	19.6
TraesCS3D01G455500.1	Wheat	cytosol	18.57	19.47
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	20.95	19.33
TraesCS5D01G312200.1	Wheat	cytosol	17.3	19.29
TraesCS5D01G026900.1	Wheat	plastid	24.29	19.1
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	15.71	18.86
AT4G03440.1	Thale cress	cytosol	22.22	18.64
VIT_14s0081g00370.t01	Wine grape	cytosol	10.0	18.48
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	22.06	18.1
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	22.86	17.5
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	17.94	15.98
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	21.75	15.46
VIT_12s0059g00120.t01	Wine grape	cytosol	18.1	13.82
TraesCS1D01G079400.1	Wheat	cytosol	19.68	11.68

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF116
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G326300	EnsemblPlants:TraesCS4D01G326300.1	TIGR:cd00204
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:486147872..486151808

Molecular Weight (calculated)

67753.1 Da

IEP (calculated)

8.752

GRAVY (calculated)

0.145

Length

630 amino acids

Sequence
(BLAST)

001: MDLGRPASCK DGSMFMCPRL YTAAFEGQTE EVTGLLMGSS VDAPAAARNG RPSTAVNHRG PCTAQEVTAE RNTLLHIAAG QGHGGLIAEL CYRDSSLLSS
101: VNKALDTPLH SAARAGGANA VEDIVRLARA NCLEEGGVII RGKNVAGDTA MHLAARHGHG AAVEKLVKLA PELASELNRA GVSSLYLAVT SGSVDAVRAI
201: VSHGDASAAG PNQQNALHAA VLESSEMVDL LLQWRPALGS DLDINKSSPL HFASSDGDCS VIEKIITHSP PNTTYLQDSE GLSALSAAAL MGHVSAVRLL
301: LRFHPACADV RDNHGRTFLH AAAMKGHSSI VSYVIKDIML EHLLNTQDNE GNTPLHLAVV AGEHKVIYKL LSSGKVRAHI MNDAGCTPSD LIENSTGFYS
401: MASLVVELYV MGARFRPQRQ DHIEKWNGQD IMKWRETTSK NIAVVSTLVA TVAFSAAFNV PGSYGSSGKA NLSGHRRYDA FMVLDTIAMT TSVIATILLI
501: YGRASRSHRS WLGFMVAMHF LWLSLNSMML AFFTAMVAVM REKNSMKVAL TQVIYNGLYI LMTLLANLAT PRSLLGVMQL LVGSCFERRR RAKRRISRQF
601: PFVIFYALNV VVFIVVNTLA LSAIQVTGGM

Best Arabidopsis Sequence Match ( AT4G14390.2 )
(BLAST)

001: MDSSEAELDR IEAQRSTDAS HDQQNRTYLP MNIHGSQDFS QSGGDGVTPL TGDTESVPEF LTNLRLSDLY AIRGEDVRMI PEVFSKISDG NKECLEKLRS
101: RGISVARIKS NTGDSILHLA VTWGHLELVK EIVCECPRLL LEQNSSGQTP LHVAAHSGHT TIVEAFVALV TFSSARLCNE ESERMNPYVL KDKDGNTALY
201: YAIEGRYFEM AVCLVNANQD APFLGNKYGV SSLFVAINTG DVSLVKAILK IIGNKDLKGK KSNLESKLQG QKSLAHVALV TQSIGVLDVI LDEYPSLMDE
301: RDINGWTCLS LAAHIGYYEG VCNLLERSTK GVYVCDQDGS FPIHTAAEKG HENIVEEFIK RCPGSKHLLN KLGQNVLHIA AKNGKFWISN MLIINKDTEH
401: LGVGQDVDGN TPLHLAVMNW HFKSITWLAR SSKILKVRNK NGLRARDIAE REVKPHYIFQ ERWTLALLLY AIHSRGFESV HSLTKPSVPL DPKNNRDYVN
501: TLLLVAALVA TMTFAAGFTI PGGFNSSAPH LGRATLATNP TLFIFLVLDI LAMQSSVATI GILIWAQLGD PVLIRSSLHV ALPLLLFALL CMPLAFLFGV
601: VTAVGHVKWL VVIICIISVL FFSWAIFVLG PHVMLQRSYV SPKYAGDFLV TFMQYKDIIG LFVSLIKFLF CGCY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4JVF4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.