Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G387800.2 | Wheat | cytosol | 98.92 | 99.1 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 98.74 | 98.74 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 96.76 | 97.11 |
| Os01t0837000-01 | Rice | cytosol | 90.45 | 90.29 |
| Zm00001d042948_P001 | Maize | cytosol | 89.55 | 89.23 |
| EES03848 | Sorghum | cytosol | 89.01 | 88.85 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 66.67 | 72.55 |
| KRG92972 | Soybean | cytosol | 66.13 | 62.73 |
| Solyc05g054830.2.1 | Tomato | nucleus | 65.59 | 62.33 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 65.23 | 61.99 |
| KRH36223 | Soybean | cytosol | 65.95 | 61.82 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 65.05 | 61.29 |
| CDY42145 | Canola | cytosol | 63.78 | 60.51 |
| Bra034760.1-P | Field mustard | cytosol | 63.6 | 60.34 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 62.7 | 60.31 |
| AT3G12360.1 | Thale cress | cytosol | 63.78 | 60.0 |
| CDY07932 | Canola | nucleus, plastid | 64.14 | 59.43 |
| CDY50335 | Canola | cytosol | 63.06 | 59.42 |
| CDY50551 | Canola | cytosol | 62.88 | 59.25 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 67.75 | 58.93 |
| Bra001304.1-P | Field mustard | nucleus | 64.14 | 58.46 |
| CDX73985 | Canola | nucleus | 64.14 | 58.46 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 64.5 | 58.31 |
| Solyc10g084550.1.1 | Tomato | plastid | 59.46 | 56.41 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 60.72 | 55.25 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 69.37 | 54.46 |
| CDY08436 | Canola | cytosol | 63.6 | 53.48 |
| TraesCS4D01G203200.1 | Wheat | cytosol | 44.14 | 45.37 |
| TraesCS6D01G277900.1 | Wheat | cytosol, plasma membrane | 40.0 | 42.29 |
| TraesCS7D01G268900.1 | Wheat | cytosol | 41.44 | 41.82 |
| TraesCS5D01G312200.1 | Wheat | cytosol | 40.72 | 40.0 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 50.63 | 33.57 |
| TraesCS3D01G535100.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.96 | 24.48 |
| TraesCS1D01G025500.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.4 | 21.72 |
| TraesCS7D01G410500.1 | Wheat | cytosol | 22.16 | 21.58 |
| TraesCS6D01G011400.1 | Wheat | peroxisome | 20.36 | 20.73 |
| TraesCS3D01G345200.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.44 | 20.62 |
| TraesCS7D01G043800.1 | Wheat | plastid | 16.4 | 19.91 |
| TraesCS1D01G025900.1 | Wheat | plasma membrane | 10.63 | 19.8 |
| TraesCS1D01G379500.2 | Wheat | cytosol | 19.64 | 18.63 |
| TraesCS2D01G224000.2 | Wheat | plastid | 21.44 | 18.22 |
| TraesCS5D01G343400.1 | Wheat | cytosol | 21.26 | 18.21 |
| TraesCS3D01G533500.1 | Wheat | cytosol | 19.28 | 18.14 |
| TraesCS1D01G025800.1 | Wheat | golgi, plasma membrane, vacuole | 6.13 | 18.09 |
| TraesCS3D01G515100.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.72 | 17.8 |
| TraesCS5D01G190200.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.44 | 17.76 |
| TraesCS6D01G394900.2 | Wheat | cytosol | 21.62 | 17.67 |
| TraesCS4D01G326300.1 | Wheat | cytosol | 20.0 | 17.62 |
| TraesCS7D01G034400.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.84 | 17.37 |
| TraesCS3D01G042100.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.82 | 17.32 |
| TraesCS6D01G395300.1 | Wheat | plastid | 20.72 | 17.24 |
| TraesCS3D01G455500.1 | Wheat | cytosol | 18.56 | 17.14 |
| TraesCS5D01G443900.1 | Wheat | mitochondrion | 20.72 | 17.04 |
| TraesCS7D01G019300.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.54 | 16.96 |
| TraesCS3D01G534600.1 | Wheat | plasma membrane | 18.38 | 16.83 |
| TraesCS5D01G342600.1 | Wheat | cytosol | 20.54 | 16.55 |
| TraesCS5D01G206000.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.64 | 16.22 |
| TraesCS6D01G395500.1 | Wheat | plasma membrane, plastid | 20.18 | 16.21 |
| TraesCS1D01G025700.1 | Wheat | plasma membrane | 20.54 | 15.86 |
| TraesCS4D01G352600.1 | Wheat | plasma membrane | 18.74 | 15.78 |
| TraesCS6D01G395200.1 | Wheat | plasma membrane | 20.72 | 15.73 |
| TraesCS1D01G011300.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.0 | 15.61 |
| TraesCS3D01G352000.1 | Wheat | cytosol | 20.36 | 15.37 |
| TraesCS1D01G045000.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.56 | 15.08 |
| TraesCS5D01G357200.1 | Wheat | cytosol | 20.18 | 14.47 |
| TraesCS6D01G396100.2 | Wheat | cytosol, peroxisome, plasma membrane | 19.28 | 14.36 |
| TraesCS5D01G026900.1 | Wheat | plastid | 17.66 | 12.23 |
| TraesCS1D01G079400.1 | Wheat | cytosol | 19.46 | 10.17 |
| TraesCS3D01G352300.1 | Wheat | cytosol | 5.59 | 9.28 |
Protein Annotations
| Gene3D:1.25.40.20 | Gene3D:1.25.40.960 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 |
| PANTHER:PTHR24177:SF68 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G348800 | EnsemblPlants:TraesCS3D01G348800.2 |
| TIGR:cd00204 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:460418797..460422282
Molecular Weight (calculated)
60636.2 Da
IEP (calculated)
9.861
GRAVY (calculated)
-0.128
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPEIREEGG SGAGTSATKA MSVSLSGKRG RYVRQVTGRH NDTDLHVAAR AGDAAALRRA LDEAAVVVAV GEEGEQLEAV RRAVAAEANE AGETPLLAAA
101: ERGHLEVVVE LLRHLDSQGV AAKNRSGYDA LHVAAREGHH AVVQEMLRHD RMFAKTFGLA NTTPLISAAT RGHAEVVQLL LEQDDFGLGE MAKDNGKNAL
201: HFAARQGHME IVKALLEKDP QLARRNDKKG QTALHMAVKG TNCDVLRALV DADPAIVMLP DKNGNTALHV ATRKKRAEIV IVLLRLPDTH VNALNRDHKT
301: AFDIAEGLPH CEESSEIKDI LSQHGALRSR ELNQPRDELR KTVTEIKKDV HTQLEQTRKT NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA
401: IFTVPGGNEN NGVAIVVQTA SFRIFFIFNA IALFTSLAVV VVQITVVRGE TKSERKVVEV INKLMWLASV CTTISFIASC YIVLGRHFQW AAILVSLIGG
501: VTMTGVLGTM TYFVVKSKRM RKIRKKEKMS RRSGSSSWVD NTEISETELN QVYAL
101: ERGHLEVVVE LLRHLDSQGV AAKNRSGYDA LHVAAREGHH AVVQEMLRHD RMFAKTFGLA NTTPLISAAT RGHAEVVQLL LEQDDFGLGE MAKDNGKNAL
201: HFAARQGHME IVKALLEKDP QLARRNDKKG QTALHMAVKG TNCDVLRALV DADPAIVMLP DKNGNTALHV ATRKKRAEIV IVLLRLPDTH VNALNRDHKT
301: AFDIAEGLPH CEESSEIKDI LSQHGALRSR ELNQPRDELR KTVTEIKKDV HTQLEQTRKT NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA
401: IFTVPGGNEN NGVAIVVQTA SFRIFFIFNA IALFTSLAVV VVQITVVRGE TKSERKVVEV INKLMWLASV CTTISFIASC YIVLGRHFQW AAILVSLIGG
501: VTMTGVLGTM TYFVVKSKRM RKIRKKEKMS RRSGSSSWVD NTEISETELN QVYAL
001: MEKGGMILLQ SSENQNPMID PSPTPSPSAT ATAPALVLSN SGKRMDQAGK KKYVKQVTGR HNDTELHLAA QRGDLAAVQQ ILKDINSQME GILSGEEFDA
101: EVAEIRASIV NEVNELGETA LFTAADKGHL DVVKELLKYS SRESIAKKNR SGYDPLHIAA IQGHHAIVEV LLDHDATLSQ TFGPSNATPL VSAAMRGHTE
201: VVNQLLSKAG NLLEISRSNN KNALHLAARQ GHVEVIKALL SKDPQLARRI DKKGQTALHM AVKGQSSEVV KLLLDADPAI VMQPDKSCNT ALHVATRKKR
301: AEIVELLLSL PDTNANTLTR DHKTALDIAE GLPLSEESSY IKECLARSGA LRANELNQPR DELRSTVTQI KNDVHIQLEQ TKRTNKNVHN ISKELRKLHR
401: EGINNATNSV TVVAVLFATV AFAAIFTVPG GDNNDGSAVV VGRASFKIFF IFNALALFTS LAVVVVQITL VRGETKAEKR VVEVINKLMW LASMCTSVAF
501: LASSYIVVGR KNEWAAELVT VVGGVIMAGV LGTMTYYVVK SKRTRSMRKK VKSARRSGSN SWHHSDFSNS EVDPIFAI
101: EVAEIRASIV NEVNELGETA LFTAADKGHL DVVKELLKYS SRESIAKKNR SGYDPLHIAA IQGHHAIVEV LLDHDATLSQ TFGPSNATPL VSAAMRGHTE
201: VVNQLLSKAG NLLEISRSNN KNALHLAARQ GHVEVIKALL SKDPQLARRI DKKGQTALHM AVKGQSSEVV KLLLDADPAI VMQPDKSCNT ALHVATRKKR
301: AEIVELLLSL PDTNANTLTR DHKTALDIAE GLPLSEESSY IKECLARSGA LRANELNQPR DELRSTVTQI KNDVHIQLEQ TKRTNKNVHN ISKELRKLHR
401: EGINNATNSV TVVAVLFATV AFAAIFTVPG GDNNDGSAVV VGRASFKIFF IFNALALFTS LAVVVVQITL VRGETKAEKR VVEVINKLMW LASMCTSVAF
501: LASSYIVVGR KNEWAAELVT VVGGVIMAGV LGTMTYYVVK SKRTRSMRKK VKSARRSGSN SWHHSDFSNS EVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.