Factsheet for HORVU3Hr1G087050.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G387800.2	Wheat	cytosol	97.47	97.29
TraesCS3D01G348800.2	Wheat	cytosol	97.11	96.76
TraesCS3A01G354800.1	Wheat	cytosol	97.11	96.76
Os01t0837000-01	Rice	cytosol	90.42	89.93
Zm00001d042948_P001	Maize	cytosol	89.51	88.87
EES03848	Sorghum	cytosol	88.79	88.31
GSMUA_Achr6P34410_001	Banana	cytosol	67.09	72.75
KRG92972	Soybean	cytosol	66.91	63.25
Solyc05g054830.2.1	Tomato	nucleus	66.0	62.5
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	66.0	62.5
KRH36223	Soybean	cytosol	66.73	62.33
VIT_13s0067g03880.t01	Wine grape	cytosol	65.46	61.46
CDY42145	Canola	cytosol	64.38	60.85
Bra034760.1-P	Field mustard	cytosol	64.2	60.68
Bra038714.1-P	Field mustard	cytosol, plastid	63.29	60.66
AT3G12360.1	Thale cress	cytosol	64.38	60.34
CDY50335	Canola	cytosol	63.65	59.76
CDY50551	Canola	cytosol	63.47	59.59
CDY07932	Canola	nucleus, plastid	64.38	59.43
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.99	58.93
Bra001304.1-P	Field mustard	nucleus	64.38	58.46
CDX73985	Canola	nucleus	64.38	58.46
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	64.74	58.31
Solyc10g084550.1.1	Tomato	plastid	59.31	56.07
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	69.98	55.68
PGSC0003DMT400028722	Potato	cytosol, plastid	60.58	54.92
CDY08436	Canola	cytosol	64.2	53.79
HORVU7Hr1G056430.1	Barley	cytosol	41.23	41.38
HORVU5Hr1G079730.3	Barley	cytosol	40.51	39.65
HORVU4Hr1G058450.9	Barley	plastid	38.7	34.8
GSMUA_Achr9P03090_001	Banana	cytosol	51.18	33.81
HORVU4Hr1G089710.1	Barley	cytosol, extracellular	7.59	22.83
HORVU5Hr1G084850.1	Barley	cytosol	14.83	22.47
HORVU7Hr1G096820.1	Barley	cytosol	21.52	21.17
HORVU1Hr1G017320.2	Barley	cytosol	11.21	20.95
HORVU3Hr1G087640.1	Barley	cytosol	21.7	20.8
HORVU2Hr1G045100.5	Barley	plasma membrane	20.07	20.71
HORVU3Hr1G115720.2	Barley	cytosol, peroxisome, plasma membrane	21.7	20.55
HORVU3Hr1G115640.1	Barley	plastid	20.98	19.86
HORVU6Hr1G000310.2	Barley	cytosol, peroxisome	20.25	19.61
HORVU3Hr1G115700.1	Barley	cytosol, plastid	20.07	19.11
HORVU7Hr1G008610.5	Barley	cytosol, plastid	18.08	18.52
HORVU6Hr1G017980.1	Barley	cytosol, peroxisome	20.25	18.51
HORVU6Hr1G093780.3	Barley	plastid	16.64	18.07
HORVU0Hr1G030080.2	Barley	plasma membrane	20.8	17.88
HORVU5Hr1G056340.3	Barley	cytosol	20.98	17.74
HORVU3Hr1G017090.2	Barley	cytosol	20.8	17.64
HORVU3Hr1G014910.1	Barley	cytosol, peroxisome	19.89	17.63
HORVU5Hr1G023700.1	Barley	plasma membrane	20.07	17.45
HORVU6Hr1G094920.12	Barley	mitochondrion, plasma membrane	20.25	17.36
HORVU3Hr1G115520.15	Barley	mitochondrion, peroxisome, plastid	19.17	17.26
HORVU5Hr1G009440.6	Barley	mitochondrion	20.07	16.82
HORVU7Hr1G010020.1	Barley	cytosol, peroxisome, plastid	19.53	16.54
HORVU1Hr1G091970.5	Barley	plasma membrane	20.43	16.33
HORVU3Hr1G105070.7	Barley	cytosol	19.89	16.32
HORVU3Hr1G115780.11	Barley	plastid	18.26	16.08
HORVU2Hr1G045370.3	Barley	plastid	17.36	15.64
HORVU3Hr1G086490.1	Barley	cytosol	19.89	14.97
HORVU2Hr1G005760.2	Barley	cytosol, plasma membrane	18.26	14.57
HORVU1Hr1G003630.3	Barley	mitochondrion	21.52	14.55
HORVU2Hr1G003780.1	Barley	cytosol, nucleus	16.64	12.4
HORVU1Hr1G003650.1	Barley	cytosol	6.51	10.98
HORVU1Hr1G016540.30	Barley	plasma membrane	18.08	9.51
HORVU5Hr1G096710.1	Barley	cytosol	5.06	8.67
HORVU5Hr1G087080.2	Barley	cytosol	5.06	8.67

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:35.1	EMBL:AK355148	EMBL:AK359870	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	UniProt:F2CU46	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU3Hr1G087050	EnsemblPlants:HORVU3Hr1G087050.1	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF68	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI0002004DD7	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CU46]

Coordinates

chrchr3H:+:619776315..619780370

Molecular Weight (calculated)

60184.8 Da

IEP (calculated)

9.813

GRAVY (calculated)

-0.115

Length

553 amino acids

Sequence
(BLAST)

001: MLPEIREEGG VGTSATKAMS ASLSGKRGRY VRQVTGRHND TDLHVAARAG DAAALRRALD EAAVVVAAGE AGEGLEAVRR AVAAEANEAG ETPLLAAAEK
101: GHLEVVVELL RHLDAHGVAA KNRSGYDALH VAAREGHHAV VQEMLCHDRM AAKTFGPANT TPLISAATRG HAEVVKLLLE QDDFGLGEMA KDNGKNALHF
201: AARQGHMEIV KALLEKDPQL ARRNDKKGQT ALHMAVKGTN CDVLRALVDA DPAIVMLPDK NGNTALHVAT RKKRAEIVIV LLRLPDTHVN ALNRDHKTAF
301: DIAEGLPHCE ESSDIKDILS QHGALRSREL NQPRDELRKT VTEIKKDVHT QLEQTRKTNK NVHGIAKELR KLHREGINNA TNSVTVVAVL FATVAFAAIF
401: TVPGGNENNG VAIVVQTASF RIFFIFNAIA LFTSLAVVVV QITVVRGETK SERKVVEVIN KLMWLASICT TISFIASCYI VLGRHFQWAA ILVSLIGGVT
501: MTGVLGTMTY YVVKSKRMRK IRKKEKMSRR SGSSSWIDNT EISETELNQV YAL

Best Arabidopsis Sequence Match ( AT3G09550.1 )
(BLAST)

001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.