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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034760.1-P Field mustard cytosol 88.48 99.83
CDY42145 Canola cytosol 88.18 99.49
CDY50551 Canola cytosol 85.76 96.1
AT3G12360.1 Thale cress cytosol 85.61 95.76
CDY50335 Canola cytosol 85.45 95.76
VIT_13s0067g03880.t01 Wine grape cytosol 69.39 77.76
KRG92972 Soybean cytosol 68.79 77.61
KRH36223 Soybean cytosol 68.94 76.86
GSMUA_Achr11P... Banana cytosol 57.12 76.78
GSMUA_Achr5P07190_001 Banana cytosol 60.61 76.05
GSMUA_Achr9P04170_001 Banana cytosol 58.64 75.88
GSMUA_Achr7P15350_001 Banana cytosol, plastid 62.73 74.19
GSMUA_Achr6P33220_001 Banana cytosol 60.45 72.94
GSMUA_Achr6P34410_001 Banana cytosol 56.36 72.94
CDY07932 Canola nucleus, plastid 63.48 69.95
CDX73985 Canola nucleus 63.48 68.8
Zm00001d042948_P001 Maize cytosol 54.55 64.63
EES03848 Sorghum cytosol 54.39 64.57
Os01t0837000-01 Rice cytosol 54.24 64.39
HORVU3Hr1G087050.1 Barley cytosol 53.79 64.2
TraesCS3A01G354800.1 Wheat cytosol 53.94 64.14
TraesCS3B01G387800.2 Wheat cytosol 53.64 63.9
TraesCS3D01G348800.2 Wheat cytosol 53.48 63.6
Os03t0281000-01 Rice nucleus, peroxisome, plasma membrane 64.09 62.02
EER95067 Sorghum cytosol, nucleus, plasma membrane 64.55 61.92
Zm00001d028679_P002 Maize cytosol, nucleus, plasma membrane 64.24 61.27
TraesCS4B01G202400.2 Wheat cytosol, nucleus, plasma membrane 64.39 61.24
Zm00001d047772_P002 Maize plastid 64.55 61.21
HORVU4Hr1G058480.2 Barley cytosol, nucleus, plasma membrane 64.39 61.15
TraesCS4D01G203300.1 Wheat cytosol, nucleus, plasma membrane 64.55 60.25
TraesCS4A01G102200.2 Wheat nucleus 64.24 58.73
CDX93618 Canola cytosol 20.76 47.57
CDY55069 Canola cytosol, peroxisome, plasma membrane 16.82 46.25
CDX88738 Canola plastid 37.12 45.71
CDX71059 Canola plastid 37.27 45.05
CDX95126 Canola cytosol 35.91 43.89
CDY10435 Canola cytosol 33.64 42.13
CDY70132 Canola cytosol 33.18 41.56
CDY58363 Canola cytosol 35.0 41.55
CDY15549 Canola cytosol 34.55 40.86
CDY36249 Canola cytosol 32.12 39.63
CDY17652 Canola cytosol 31.97 39.59
CDY19113 Canola cytosol 35.45 37.08
GSMUA_Achr9P03090_001 Banana cytosol 46.36 36.56
CDX86566 Canola cytosol 31.36 35.88
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 33.03 35.05
CDY59983 Canola cytosol 15.61 34.11
CDX73200 Canola cytosol 15.61 34.11
CDX99605 Canola cytosol 14.7 34.04
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 32.12 33.81
CDY16446 Canola cytosol 0.61 28.57
CDY58683 Canola cytosol 11.21 24.26
CDY16445 Canola cytosol, plasma membrane, plastid 20.15 23.54
CDY69308 Canola plasma membrane 17.73 19.73
CDY20943 Canola cytosol 17.12 19.65
CDY39673 Canola plasma membrane 17.73 19.5
CDY58682 Canola cytosol 2.42 19.05
CDY20635 Canola plasma membrane 16.82 19.04
CDY18182 Canola cytosol, peroxisome, plasma membrane 15.91 18.62
CDY30009 Canola cytosol, plasma membrane, plastid 16.52 18.47
CDY20639 Canola cytosol, peroxisome, plasma membrane 12.42 17.9
CDY48208 Canola cytosol 16.67 17.66
CDX74181 Canola cytosol, peroxisome, plasma membrane 15.45 17.65
CDY40662 Canola plasma membrane 15.15 17.33
CDY40658 Canola cytosol, peroxisome, plasma membrane 15.15 17.33
CDY35767 Canola cytosol, peroxisome, plasma membrane 15.61 16.83
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 3.94 16.77
CDY45914 Canola cytosol 11.06 16.63
CDY42176 Canola cytosol, peroxisome, plasma membrane 16.06 16.38
CDY48209 Canola cytosol, peroxisome, plasma membrane 15.0 14.02
CDY21967 Canola plasma membrane 14.85 12.98
CDY48563 Canola cytosol, nucleus, plasma membrane, plastid 13.48 12.57
CDY21969 Canola nucleus 5.15 10.15
CDY20642 Canola nucleus 12.73 5.89
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078F4T8UniProt:A0A078F4T8InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY08436ProteinID:CDY08436ProteinID:CDY08436.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00000197001InterPro:IPR002110
InterPro:IPR020683InterPro:IPR036770PFAM:PF00023PFAM:PF12796PFAM:PF13962InterPro:PGG_dom
PFscan:PS50088PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF107SMART:SM00248SUPFAM:SSF48403
TMHMM:TMhelixUniParc:UPI0004EE9E15SEG:seg:::
Description
BnaA05g26720DBnaA05g26720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4T8]
Coordinates
chrLK031986:-:174536..178037
Molecular Weight (calculated)
72414.6 Da
IEP (calculated)
10.191
GRAVY (calculated)
-0.147
Length
660 amino acids
Sequence
(BLAST)
001: MTIITRHKLE LHKKKRMYKL TEQLCKSYTK SSFSITSHFP ISFILSLSIF PQLHLKNKHT KHLSFFYLSL LRASLMAASS VLDGDIDMEK GGMILQSSEN
101: QDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ MEGTLSGEEF DAEVAEIRAS IVNEVNELGE
201: TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SHTFGPSNAT PLVSAAMRGH TEVVNQLLSK AGNLLDISRS
301: NHKNALHLAA RQGHVEVIKA LLAKDAHLAR RVDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMLPDKSC NTALHVATRK KRAEIVELLL SLPDTNANAL
401: TRERKTALDI AEGLPLSEES SYIKECLARR GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV HNISKELRKL HREGINNATN SVTVVAVLFA
501: TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNAIALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL MWLASMCTSV AFLASSYIVV GRKNQWAAEL
601: VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDYS NSEVDPIFAI
Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.