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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005639.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 95.37 96.92
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 95.37 96.14
CDY58363 Canola cytosol 78.79 88.85
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 92.5 87.61
CDY19113 Canola cytosol 87.4 86.85
CDY15549 Canola cytosol 73.05 82.08
CDX86566 Canola cytosol 67.46 73.31
KRH27553 Soybean cytosol, peroxisome, plasma membrane 29.35 72.44
KRG97307 Soybean cytosol 63.8 71.68
KRH69034 Soybean cytosol 64.11 71.02
VIT_05s0094g01320.t01 Wine grape cytosol 65.71 70.55
Solyc12g019060.1.1 Tomato cytosol 60.77 66.84
GSMUA_Achr7P23720_001 Banana cytosol, peroxisome, plasma membrane 24.88 66.67
PGSC0003DMT400052568 Potato cytosol 60.29 66.2
Solyc12g096670.1.1 Tomato cytosol 59.81 65.33
PGSC0003DMT400075256 Potato cytosol 57.89 64.48
PGSC0003DMT400064924 Potato cytosol 56.62 64.43
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 57.26 63.88
KRH64845 Soybean cytosol 55.5 62.93
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome, plasma membrane 53.91 58.58
TraesCS7B01G166600.1 Wheat cytosol 51.36 58.55
TraesCS7D01G268900.1 Wheat cytosol 51.36 58.55
EES15259 Sorghum cytosol 52.47 58.54
HORVU7Hr1G056430.1 Barley cytosol 51.36 58.44
Os08t0542700-01 Rice cytosol 51.67 58.17
TraesCS7A01G265800.1 Wheat cytosol 50.88 58.0
Zm00001d031706_P001 Maize cytosol 51.36 57.4
Os09t0518500-01 Rice cytosol 50.88 56.76
EER97054 Sorghum cytosol 50.72 56.58
TraesCS5D01G312200.1 Wheat cytosol 50.72 56.28
TraesCS5B01G305700.1 Wheat cytosol 50.72 56.28
Zm00001d006147_P002 Maize cytosol 50.4 56.23
Zm00001d006142_P002 Maize cytosol 50.4 56.23
HORVU5Hr1G079730.3 Barley cytosol 50.56 56.11
TraesCS5A01G305200.1 Wheat cytosol 50.24 55.75
Zm00001d021169_P002 Maize cytosol 50.88 55.67
CDX93618 Canola cytosol 24.72 53.82
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane, plastid 55.34 53.38
CDX95126 Canola cytosol 45.93 53.33
CDX88738 Canola plastid 45.3 52.99
CDX71059 Canola plastid 45.77 52.56
CDY55069 Canola cytosol, peroxisome, plasma membrane 19.62 51.25
GSMUA_Achr7P23730_001 Banana cytosol 25.68 50.79
CDY10435 Canola cytosol 39.23 46.68
CDY70132 Canola cytosol 39.08 46.49
CDX73200 Canola cytosol 19.14 39.74
CDY59983 Canola cytosol 18.98 39.4
CDX99605 Canola cytosol 17.86 39.3
CDY17652 Canola cytosol 32.06 37.71
CDY36249 Canola cytosol 31.9 37.38
CDY42145 Canola cytosol 33.81 36.24
CDY50551 Canola cytosol 33.65 35.82
CDY50335 Canola cytosol 33.49 35.65
CDY07932 Canola nucleus, plastid 33.97 35.56
CDX73985 Canola nucleus 34.13 35.14
CDY08436 Canola cytosol 33.81 32.12
CDY45915 Canola extracellular, plasma membrane, plastid, vacuole 5.42 21.94
CDY69308 Canola plasma membrane 19.62 20.74
CDY16445 Canola cytosol, plasma membrane, plastid 18.66 20.71
CDY20943 Canola cytosol 18.98 20.7
CDY39673 Canola plasma membrane 19.78 20.67
CDY20635 Canola plasma membrane 18.98 20.41
CDY58683 Canola cytosol 9.89 20.33
CDY20639 Canola cytosol, peroxisome, plasma membrane 14.51 19.87
CDY18182 Canola cytosol, peroxisome, plasma membrane 16.75 18.62
CDY58682 Canola cytosol 2.39 17.86
CDX74181 Canola cytosol, peroxisome, plasma membrane 16.11 17.47
CDY30009 Canola cytosol, plasma membrane, plastid 16.27 17.29
CDY40658 Canola cytosol, peroxisome, plasma membrane 15.79 17.16
CDY40662 Canola plasma membrane 15.63 16.98
CDY48208 Canola cytosol 16.59 16.69
CDY35767 Canola cytosol, peroxisome, plasma membrane 16.11 16.5
CDY42176 Canola cytosol, peroxisome, plasma membrane 16.43 15.92
CDY48209 Canola cytosol, peroxisome, plasma membrane 16.11 14.31
CDY21967 Canola plasma membrane 17.07 14.17
CDY45914 Canola cytosol 9.73 13.9
CDY48563 Canola cytosol, nucleus, plasma membrane, plastid 14.35 12.71
CDY21969 Canola nucleus 5.42 10.15
CDY16446 Canola cytosol 0.16 7.14
CDY20642 Canola nucleus 14.67 6.45
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1GO:A0A078H7N7UniProt:A0A078H7N7InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDY34515ProteinID:CDY34515ProteinID:CDY34515.1ncoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00056899001
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF12796PFAM:PF13962InterPro:PGG_dom
PFscan:PS50088PFscan:PS50297PANTHER:PTHR24186PANTHER:PTHR24186:SF8SMART:SM00248SUPFAM:SSF48403
TMHMM:TMhelixUniParc:UPI0004EEF419SEG:seg:::
Description
BnaC04g12840DBnaC04g12840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7N7]
Coordinates
chrLK032335:+:389097..391673
Molecular Weight (calculated)
69041.1 Da
IEP (calculated)
10.024
GRAVY (calculated)
-0.182
Length
627 amino acids
Sequence
(BLAST)
001: MTIMEEKQSS PVHQTKTMEK QQSFRCVENN NNPPRKARSL EKQVSFQGVS VENHHHPSRL GRSMEKQQSF RGVTTAENQK RGLIMEKLPS FGKASTTMER
101: QKSFRGGFLE KQKSFRVVME RQLSFIGERR KKTESPGKRG DSPLHIAART GNLGKVKDLF RGGCDGEELL SKQNLEGETP LYTAAENGHS AVVEEMLERM
201: DLQTASIAAR NGFDPFHVAA KQGHLEVLKI LLETFPNLAM TTDLLCTTAL HTAATQGHID VVNLLLETDS NLAKIAKNNG KTALHSAARM GHVEVVKSLI
301: GQNDGIVVEL VKPDVAVLSV EDNKGNTPLH IATNKGRIKI VRCLLSFEGI NLNPINKAGD TPLDVAERIG NAELASVLKE AGAATAKDLG KPQNPAKQLK
401: QTVSDIKHEV QSQLQQSRQT GVRVQKIAKR LKKLHISGLN NAINSATVVA VLIATVAFAA IFTIPGQYEE DRSKGDLLGQ AHIANKAPFL VFFIFDSLAL
501: FISLAVVVVQ TSVVVIEEKA KKKLVFVINK LMWCACLFIS IAFVSLSYIV VGKEEMWLAV CATVIGGTIM LTTIGAMCYC VIMHRVEESK LKSIRKERSK
601: SQSFSMSRMP SDSEILNGEY NKRMYAL
Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.