CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006680.1-P	Field mustard	plastid	99.81	97.99
CDX71059	Canola	plastid	99.63	97.8
AT5G60070.1	Thale cress	cytosol, plastid	92.91	90.88
CDX95126	Canola	cytosol	68.47	67.96
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	68.28	67.53
CDX93618	Canola	cytosol	36.01	67.01
KRH10329	Soybean	cytosol	68.1	66.97
KRH22984	Soybean	cytosol	68.1	66.97
KRG88671	Soybean	cytosol, plastid	67.54	65.94
KRH25003	Soybean	cytosol, plastid	67.35	65.88
CDY55069	Canola	cytosol, peroxisome, plasma membrane	29.1	65.0
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	64.18	64.3
PGSC0003DMT400078144	Potato	cytosol	63.99	64.11
Solyc11g072960.1.1	Tomato	cytosol	62.69	63.28
PGSC0003DMT400040191	Potato	cytosol	62.69	62.69
GSMUA_Achr8P02120_001	Banana	cytosol	62.69	62.45
TraesCS4B01G202300.1	Wheat	cytosol	61.57	61.11
TraesCS4D01G203200.1	Wheat	cytosol	61.57	61.11
PGSC0003DMT400025094	Potato	cytosol	60.45	60.0
TraesCS4A01G102300.1	Wheat	cytosol	60.82	59.71
Os03t0281100-00	Rice	cytosol	62.87	59.65
Zm00001d028680_P001	Maize	cytosol	59.51	56.76
GSMUA_Achr6P33230_001	Banana	cytosol	62.5	56.49
CDY70132	Canola	cytosol	55.41	56.36
CDY10435	Canola	cytosol	55.22	56.17
Solyc06g005240.2.1	Tomato	cytosol	47.01	56.0
EER95066	Sorghum	cytosol	57.65	54.5
CDY58363	Canola	cytosol	55.6	53.6
CDY15549	Canola	cytosol	54.1	51.97
CDX73200	Canola	cytosol	27.99	49.67
CDX99605	Canola	cytosol	26.31	49.47
GSMUA_Achr9P04150_001	Banana	plasma membrane	60.63	49.39
CDY59983	Canola	cytosol	27.8	49.34
CDY19113	Canola	cytosol	55.97	47.54
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	54.48	46.95
HORVU4Hr1G058450.9	Barley	plastid	53.73	46.83
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	52.99	45.3
CDX86566	Canola	cytosol	46.83	43.5
CDY42145	Canola	cytosol	45.52	41.71
CDY50335	Canola	cytosol	45.34	41.26
CDY50551	Canola	cytosol	45.34	41.26
CDY07932	Canola	nucleus, plastid	44.22	39.57
CDY17652	Canola	cytosol	38.99	39.21
CDX73985	Canola	nucleus	44.03	38.75
CDY36249	Canola	cytosol	38.62	38.69
CDY08436	Canola	cytosol	45.71	37.12
CDY58683	Canola	cytosol	13.25	23.28
CDY16445	Canola	cytosol, plasma membrane, plastid	22.01	20.89
CDY20635	Canola	plasma membrane	21.27	19.55
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	5.6	19.35
CDX74181	Canola	cytosol, peroxisome, plasma membrane	20.71	19.2
CDY39673	Canola	plasma membrane	21.46	19.17
CDY20943	Canola	cytosol	20.52	19.13
CDY30009	Canola	cytosol, plasma membrane, plastid	20.9	18.98
CDY40662	Canola	plasma membrane	20.34	18.89
CDY69308	Canola	plasma membrane	20.9	18.89
CDY40658	Canola	cytosol, peroxisome, plasma membrane	20.15	18.72
CDY20639	Canola	cytosol, peroxisome, plasma membrane	15.67	18.34
CDY18182	Canola	cytosol, peroxisome, plasma membrane	19.03	18.09
CDY48208	Canola	cytosol	20.15	17.34
CDY35767	Canola	cytosol, peroxisome, plasma membrane	19.59	17.16
CDY45914	Canola	cytosol	12.87	15.72
CDY42176	Canola	cytosol, peroxisome, plasma membrane	18.66	15.46
CDY48209	Canola	cytosol, peroxisome, plasma membrane	19.78	15.01
CDY21967	Canola	plasma membrane	20.9	14.83
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	18.28	13.84
CDY21969	Canola	nucleus	6.9	11.04
CDY58682	Canola	cytosol	1.49	9.52
CDY16446	Canola	cytosol	0.19	7.14
CDY20642	Canola	nucleus	16.6	6.24

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078DNE0	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	EnsemblPlants:CDX88738	ProteinID:CDX88738	ProteinID:CDX88738.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00148792001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF12796	PFAM:PF13606	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EE3987
SEG:seg	:	:	:	:	:

Description

BnaA03g09110D

Coordinates

chrLK031856:-:731649..733692

Molecular Weight (calculated)

58454.5 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.089

Length

536 amino acids

Sequence
(BLAST)

001: MEEASTSTST PVAAKPTVVK KTMSKQFTGK REDSPLHSAV RRGDFSAVKK ILSDHIESEE ELRELLQKQN QCGETALYVA AEYGDAEVVA ELIKYYDLDD
101: AETKARNGFD PFHIAAKQGE LEVLRVLMEE HPELAMTVDL SNTTALHTAA AQGHVEVVEY LLEAAGSSLA AIAKSNGKTA LHSAARNGHA EVVKAIVAVE
201: PDTATRTDKK GQTALHMAVK GQSLDVVVEL MKGHRSSLNM VDSKGNTALH VATRKGRTKI VELLLENNET STKAINRAGE TPLDTAEKTG HPQLAAVLKT
301: RGVPSAKSIN NTTRPNPARE LKQTVSDIKH EVHDQLEHAR ETRKRVQGIA KRINKMHVEG LDNAINSTTV VAVLIATVAF AAIFTVPGQY ADERKANIAD
401: NPAFAIFFIF DSIALFISLG VVVVQTSVVA IEHKAKKNMM AIINKLMWLA CVLISVAFLA LAFVVVGEDE RWLAVGVTVF GATIMLTTLG TMCYWVIRHR
501: IEASNVRSAR RESMARTRQS GLMDFSGILT KRMYAI

Best Arabidopsis Sequence Match ( AT5G60070.1 )
(BLAST)

001: MEEASTSTPA PMAAKPTVVK KTMAKQFTGK REDSQLLSAV RRGDFSAVKE ILSNHMESED ELRDLLRKQN QCGETALYVA AEYGDADVVA ELIKYYDLED
101: AETKARNGFD PFHIAAKQGE LDVLRVLMEE HPELSMTVDL SNTTALHTAA AQGHVEVVEY LLEAAGSSLA AIAKSNGKTA LHSAARNGHA EVVKAIVAVE
201: PDTATRTDKK GQTPLHMAVK GQSIDVVVEL MKGHRSSLNM ADSKGNTALH VATRKGRIKI VELLLDNNET SPSTKAINRA GETPLDTAEK TGHPQIAAVL
301: KTRGVPSAKA INNTTRPNAA RELKQTVSDI KHEVHHQLEH ARETRKRVQG IAKRINKMHV EGLDNAINST TVVAVLIATV AFAAIFTVPG QYADELSSLL
401: PGQSLGEANI ADRPAFAIFF IFDSIALFIS LAVVVVQTSV VAIEHKAKKN MMAVINKLMW LACVLISVAF LALAFVVVGE EERWLAVGVT VFGATIMLTT
501: LGTMCYWVIM HRIEASNVRK SRKESMARSR QSGLLEFSGI LTKRMYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVG7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.