Factsheet for Zm00001d028680_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95066	Sorghum	cytosol	91.1	90.3
TraesCS4B01G202300.1	Wheat	cytosol	80.96	84.26
TraesCS4D01G203200.1	Wheat	cytosol	80.96	84.26
Os03t0281100-00	Rice	cytosol	83.63	83.19
TraesCS4A01G102300.1	Wheat	cytosol	80.25	82.6
GSMUA_Achr8P02120_001	Banana	cytosol	69.22	72.3
KRH22984	Soybean	cytosol	64.77	66.79
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	64.06	66.42
GSMUA_Achr6P33230_001	Banana	cytosol	69.93	66.27
KRH10329	Soybean	cytosol	63.88	65.87
KRG88671	Soybean	cytosol, plastid	63.35	64.85
KRH25003	Soybean	cytosol, plastid	62.99	64.6
CDX93618	Canola	cytosol	33.1	64.58
PGSC0003DMT400078144	Potato	cytosol	61.03	64.11
HORVU4Hr1G058450.9	Barley	plastid	69.57	63.58
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	60.5	63.55
VIT_08s0040g02760.t01	Wine grape	cytosol	61.03	63.4
CDY55069	Canola	cytosol, peroxisome, plasma membrane	27.05	63.33
Solyc11g072960.1.1	Tomato	cytosol	59.61	63.09
Bra018683.1-P	Field mustard	cytosol	60.14	62.71
CDX95126	Canola	cytosol	59.96	62.41
PGSC0003DMT400040191	Potato	cytosol	59.25	62.13
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	59.96	62.06
AT5G60070.1	Thale cress	cytosol, plastid	58.19	59.67
CDX71059	Canola	plastid	57.83	59.52
Bra006680.1-P	Field mustard	plastid	57.83	59.52
CDX88738	Canola	plastid	56.76	59.51
PGSC0003DMT400025094	Potato	cytosol	56.41	58.7
KRH67582	Soybean	cytosol	53.56	57.77
PGSC0003DMT400061439	Potato	cytosol, peroxisome, plasma membrane	54.98	57.12
Solyc09g005860.2.1	Tomato	cytosol, peroxisome, plasma membrane	54.98	57.12
GSMUA_Achr9P04150_001	Banana	plasma membrane	66.73	56.99
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	53.2	56.42
Solyc06g005240.2.1	Tomato	cytosol	45.02	56.22
CDY70132	Canola	cytosol	51.78	55.22
Bra009576.1-P	Field mustard	cytosol	51.6	55.03
CDY10435	Canola	cytosol	51.42	54.84
AT5G02620.5	Thale cress	cytosol	52.14	53.56
Zm00001d031706_P001	Maize	cytosol	48.93	49.02
Zm00001d006147_P002	Maize	cytosol	48.93	48.93
Zm00001d006142_P002	Maize	cytosol	48.93	48.93
Zm00001d051244_P001	Maize	cytosol	10.68	48.78
Zm00001d021169_P002	Maize	cytosol	48.93	47.99
CDY59983	Canola	cytosol	25.09	46.69
CDX99605	Canola	cytosol	23.67	46.67
CDX73200	Canola	cytosol	24.91	46.36
Zm00001d051806_P001	Maize	cytosol, plasma membrane	39.5	42.21
Zm00001d042948_P001	Maize	cytosol	41.46	41.83
Zm00001d017959_P001	Maize	plasma membrane	39.15	41.83
Zm00001d033803_P001	Maize	plasma membrane, vacuole	20.82	37.5
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.82	37.5
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.64	37.18
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	42.88	34.83
Zm00001d047772_P002	Maize	plastid	43.06	34.77
Zm00001d030264_P001	Maize	plastid	13.7	28.95
Zm00001d025365_P001	Maize	cytosol	7.65	21.72
Zm00001d013327_P001	Maize	cytosol	21.53	21.34
Zm00001d007725_P001	Maize	cytosol	20.28	20.54
Zm00001d007743_P001	Maize	cytosol	20.82	20.45
Zm00001d000158_P001	Maize	mitochondrion	20.11	20.36
Zm00001d004738_P001	Maize	plasma membrane	22.95	19.05
Zm00001d021662_P002	Maize	plastid	21.35	17.42
Zm00001d037628_P002	Maize	plasma membrane	19.75	10.94

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100383028	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	EMBL:BT084408	UniProt:C4J0R1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	ProteinID:ONL96726.1	ProteinID:ONL96727.1	PFAM:PF12796	PFAM:PF13606	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0001A4BB7E	EnsemblPlantsGene:Zm00001d028680	EnsemblPlants:Zm00001d028680_P001	EnsemblPlants:Zm00001d028680_T001
SEG:seg	:	:	:	:	:

Description

Ankyrin repeat-containing protein

Coordinates

chr1:+:42788600..42791622

Molecular Weight (calculated)

61009.8 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.082

Length

562 amino acids

Sequence
(BLAST)

001: MEAKTNQTSG EDRPQPAMDS PRAAQAATRR KKMTKQLTGK RDDTAMHAAA RAGQLESMRQ MMSGKDAEEL GALLSRQNQA GETPLFVAAE YGYVALVAEM
101: IKYHDVATAG IKARSGYDAL HIAAKQGDVD VVRELLRALP QLSMTVDSSN TTALNTAATQ GHMDVVRLLL EVDGSLALIA RSNGKTALHS AARNGHVEVV
201: RALLEAEPSI ALRTDKKGQT ALHMAAKGTR LDLVDALLAA EPALLNQTDS KGNTALHIAA RKARHEIIRR LVTMPDTDVR AINRSRETPL DTAEKMGNTD
301: AAELLAEHGV QSARAISPCG GGGGGNKQAR ELKQQVSDIK HEVHSQLEQT RQTRVRMQGI AKRINKLHEE GLNNAINSTT VVAVLIATVA FAAIFTVPGE
401: YVQDPGSLAP GHDLGEANIS HQTAFIIFFV FDSVSLFISL AVVVVQTSVV VIERKAKKQM MAVINKLMWV ACVLISVSFL ALSFVVVGRT ERWLAVSVTI
501: MGATILVTTI GTMLYWVIAH RIEAKRIRTI KRNTLTHSRS FSCSGMSEGE WVDEDFKRMY AI

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.