CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25003	Soybean	cytosol, plastid	94.9	95.07
KRH10329	Soybean	cytosol	81.79	82.39
KRH22984	Soybean	cytosol	81.6	82.2
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	75.59	76.57
PGSC0003DMT400078144	Potato	cytosol	70.31	72.15
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	70.31	72.15
GSMUA_Achr8P02120_001	Banana	cytosol	70.31	71.75
Solyc11g072960.1.1	Tomato	cytosol	68.49	70.81
PGSC0003DMT400040191	Potato	cytosol	68.49	70.15
PGSC0003DMT400025094	Potato	cytosol	66.85	67.96
TraesCS4D01G203200.1	Wheat	cytosol	66.67	67.78
TraesCS4B01G202300.1	Wheat	cytosol	66.48	67.59
CDX88738	Canola	plastid	65.94	67.54
Bra006680.1-P	Field mustard	plastid	66.67	67.03
CDX71059	Canola	plastid	66.48	66.85
KRH67582	Soybean	cytosol	63.02	66.41
AT5G60070.1	Thale cress	cytosol, plastid	66.12	66.24
TraesCS4A01G102300.1	Wheat	cytosol	65.76	66.12
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	62.66	64.91
GSMUA_Achr6P33230_001	Banana	cytosol	69.76	64.59
Os03t0281100-00	Rice	cytosol	66.3	64.42
Solyc06g005240.2.1	Tomato	cytosol	52.64	64.22
Zm00001d028680_P001	Maize	cytosol	64.85	63.35
EER95066	Sorghum	cytosol	63.93	61.9
GSMUA_Achr9P04150_001	Banana	plasma membrane	69.03	57.6
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	26.41	57.09
KRG97307	Soybean	cytosol	54.64	53.76
KRH69034	Soybean	cytosol	55.19	53.53
HORVU4Hr1G058450.9	Barley	plastid	56.83	50.73
KRH64845	Soybean	cytosol	48.45	48.1
KRG92972	Soybean	cytosol	47.18	44.27
KRH60413	Soybean	cytosol	42.08	43.58
KRH36223	Soybean	cytosol	46.81	43.41
KRH41712	Soybean	cytosol	41.71	43.37
KRH49636	Soybean	cytosol	41.17	43.05
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	40.62	42.48
KRG95863	Soybean	cytosol, plastid	42.44	40.1
KRH67581	Soybean	cytosol, plastid	42.08	39.97
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	24.95	21.17
KRH55981	Soybean	cytosol	20.04	18.39
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	21.86	17.99
KRH25567	Soybean	plasma membrane	20.77	17.81
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	21.31	17.81
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	20.77	17.65
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	20.77	17.38
KRH42265	Soybean	cytosol	18.4	16.37
KRH55984	Soybean	cytosol	19.67	16.27
KRH55979	Soybean	mitochondrion, nucleus	4.37	10.91
KRH55986	Soybean	cytosol	5.1	10.89
KRH50654	Soybean	cytosol	4.37	10.39
KRH58386	Soybean	cytosol	19.13	10.18
KRH33072	Soybean	cytosol	3.83	9.05

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100809687	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	EnsemblPlantsGene:GLYMA_U033200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:I1LK84	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
EnsemblPlants:KRG88671	ProteinID:KRG88671	ProteinID:KRG88671.1	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403
TMHMM:TMhelix	UniParc:UPI000233C9DE	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_32:+:55511..60079

Molecular Weight (calculated)

59204.0 Da

IEP (calculated)

10.046

GRAVY (calculated)

0.016

Length

549 amino acids

Sequence
(BLAST)

001: MDTPNAQPQA ASASTPRTPR KKMTKQLTGK RDDTPLHSAA RAGNMSVLKD TVSGSEEGEL RVLLTKQNHS GETILFVAAE YGYVEMVREL IQYYDPAGAG
101: IKASNGFDAL HIAAKQGDLD IVKILMEAHP ELSMTVDPSN TTAVHTAALQ GHTEIVKLLL EAGSNLATIA RSNGKTALHS AARNGHLEVV KALLGKEPVV
201: ATRTDKKGQT ALHMAVKGQS LEVVEELIKA DPSTINMVDN KGNTALHIAT RKGRAQIIKL LLGQTETNGL VVNKSGETAL DTAEKTGNSE IKDILLEHGV
301: RSAKAIKAQP GTATARELKQ TVSDIKHEVH YQLEHTRQTR RGVQGIAKRI NKMHAEGLNN AINSTTVVAV LIATVAFAAI FTVPGQFADD PKVLPAGMTI
401: GEANIAPQAA FLIFFVFDSI ALFISLAVVV VQTSVVIIES KAKKQMMAII NKLMWLACVL ISVAFLALSF VVVGKDQKWL AIGVTIIGTT IMATTLGTMS
501: YWVIRHRIEA SNLRSIRKSS MESRSRSFSV SVMSDSELLN NERKILYAI

Best Arabidopsis Sequence Match ( AT1G07710.1 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.