CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67581	Soybean	cytosol, plastid	92.94	93.43
KRG92972	Soybean	cytosol	66.78	66.32
KRH36223	Soybean	cytosol	67.47	66.22
KRH10329	Soybean	cytosol	39.93	42.57
KRH22984	Soybean	cytosol	39.93	42.57
KRH25003	Soybean	cytosol, plastid	40.1	42.52
KRG88671	Soybean	cytosol, plastid	40.1	42.44
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	37.18	40.75
KRH67582	Soybean	cytosol	36.32	40.5
KRH49636	Soybean	cytosol	36.49	40.38
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	35.97	39.81
KRH41712	Soybean	cytosol	35.97	39.58
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	17.21	39.37
KRH60413	Soybean	cytosol	35.63	39.06
KRG97307	Soybean	cytosol	37.01	38.53
KRH69034	Soybean	cytosol	37.35	38.34
KRH64845	Soybean	cytosol	32.19	33.82
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	23.75	21.33
KRH55981	Soybean	cytosol	18.59	18.06
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	20.48	17.84
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	19.79	17.5
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	19.11	17.18
KRH25567	Soybean	plasma membrane	18.59	16.88
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	18.93	16.77
KRH55984	Soybean	cytosol	18.76	16.42
KRH42265	Soybean	cytosol	16.52	15.56
KRH50654	Soybean	cytosol	5.34	13.42
KRH33072	Soybean	cytosol	4.99	12.5
KRH55979	Soybean	mitochondrion, nucleus	4.13	10.91
KRH55986	Soybean	cytosol	4.48	10.12
KRH58386	Soybean	cytosol	17.21	9.7

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	EntrezGene:100779710	MapMan:35.1	EMBL:ACUP02012140	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_19G175300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1NA19	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRG95863	ProteinID:KRG95863	ProteinID:KRG95863.1	PFAM:PF12796	PFAM:PF13962
InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248
SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000233F5AB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:43532148..43535651

Molecular Weight (calculated)

63947.3 Da

IEP (calculated)

10.157

GRAVY (calculated)

-0.136

Length

581 amino acids

Sequence
(BLAST)

001: MDHNHHHRHH NHNHALHTTP LSEPTTPTTP RPTLFLSTSG KALLLSNSNK RLDTPRKKYV KQVTGRHNDT ELHLASQRGD VDSVRHVLAE IDSIMMGSLE
101: FDAELADIRS AIFNEVNDLG ETALFTAAEK GHLDVVRELL PYTTDDALSS KNRSGFDTLH IAASNGHLAI VQALLDHDPG LIKTFAQSNA TPLISAATRG
201: HADVVEELLS RDPTQLEMTR SNGKNALHLA ARQGHVSVVK ILLRKDPQLA RRTDKKGQTA LHMAVKGVSC EVVKLILAAD TAIVMLPDKF GNTALHVATR
301: KKRTEIVHEL LLLPDTNVNT LTRDHKTALD LAEGLPISEE ILEIKECLIR YGAVKANDLN QPRDELRKTM TQIKKDVYFQ LEQARKTNKN VSGIANELRK
401: LHRAGINNAA NSVTVVAVLF AAVAFAAMFT VPGGDNDHGV AVMVQTASFK AFFISNAIAL FTSLSVVVVQ ITIVRGEIKA ERRVVEVINK MMWLASVCTS
501: VSFISASYIV VGRRSQWAAI LVTIVGAIVM GGVLGTMTYY VVKSKRSRRM RRKKGKFSKT GTHSWRLSSS DDSEINPIYA I

Best Arabidopsis Sequence Match ( AT3G09550.2 )
(BLAST)

001: MKKKKRQPKK RIEEEKELEP GMEKGLATDP TSPTGSTVAD LSPTPTPRKT LVLSNSGKAL MVSNSSKSLG LSNSGKRFDP TGKKKYVKQV TGRHNDTELH
101: LAAQRGDLAS VKQILSDIDS QITGTITGAD FDDEVAQIMT SVVNEVNELG ETPLFTAAEK GNIDVVKELL PYTTIESLMQ KNLSGFDALH IACSQGHRSI
201: VQLLLEHEPQ LSKTVAQSNA TPLVSAATRG HSEVVNELLA KDSSLLEISR SNGKNALHLA ARQGHVDIVR TLLDKDPQLA RRTDKKGQTS LHMAVKGVSS
301: QVVRLLLRAD PAIVMLPDKF GNTVLHIATR KKRAEIVNEL LQLPDTNVNA LTRDHKTAYD IAEGLTHSEE TAEIKEILSR CGALKANELN QPRDELRKTV
401: TEIKKDVHTQ LEQTRKTNKN VDGIAKELRK LHRAGINNAT NSVTVVAVLF ATVAFAAIFT VPGGDDDHGV AVMVHATSFK IFFIFNAIAL FTSLAVVVVQ
501: ITLVRGETKT ERRVVEVINK LMWLASVCTT VAFISSSYIV VGRRNRYAAV VVTVIGTVTM TGILSIMTYY VVKSKRTRIV RKKEKKKSAR NGTSSWHHAN
601: PSETESEVNP IYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.