Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88738 | Canola | plastid | 90.88 | 92.91 |
| Bra006680.1-P | Field mustard | plastid | 92.52 | 92.86 |
| CDX71059 | Canola | plastid | 92.52 | 92.86 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.98 | 69.61 |
| KRH22984 | Soybean | cytosol | 68.43 | 68.81 |
| KRH10329 | Soybean | cytosol | 67.88 | 68.26 |
| VIT_06s0004g03980.t01 | Wine grape | cytosol, nucleus, plasma membrane | 66.42 | 67.16 |
| KRG88671 | Soybean | cytosol, plastid | 66.24 | 66.12 |
| KRH25003 | Soybean | cytosol, plastid | 66.06 | 66.06 |
| Solyc06g075600.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.42 | 65.98 |
| PGSC0003DMT400078144 | Potato | cytosol | 64.42 | 65.98 |
| GSMUA_Achr8P02120_001 | Banana | cytosol | 61.86 | 63.01 |
| Solyc11g072960.1.1 | Tomato | cytosol | 60.58 | 62.52 |
| PGSC0003DMT400040191 | Potato | cytosol | 60.77 | 62.13 |
| TraesCS4B01G202300.1 | Wheat | cytosol | 61.13 | 62.04 |
| TraesCS4D01G203200.1 | Wheat | cytosol | 61.13 | 62.04 |
| TraesCS4A01G102300.1 | Wheat | cytosol | 60.58 | 60.81 |
| Os03t0281100-00 | Rice | cytosol | 62.59 | 60.71 |
| PGSC0003DMT400025094 | Potato | cytosol | 59.31 | 60.19 |
| Zm00001d028680_P001 | Maize | cytosol | 59.67 | 58.19 |
| Solyc06g005240.2.1 | Tomato | cytosol | 46.72 | 56.89 |
| GSMUA_Achr6P33230_001 | Banana | cytosol | 61.31 | 56.66 |
| EER95066 | Sorghum | cytosol | 58.03 | 56.08 |
| AT5G02620.5 | Thale cress | cytosol | 55.66 | 55.76 |
| GSMUA_Achr9P04150_001 | Banana | plasma membrane | 59.49 | 49.54 |
| HORVU4Hr1G058450.9 | Barley | plastid | 53.47 | 47.64 |
| AT1G05640.1 | Thale cress | cytosol | 54.38 | 47.53 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 55.84 | 46.22 |
| AT3G12360.1 | Thale cress | cytosol | 45.44 | 42.2 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 38.87 | 40.04 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 43.61 | 38.93 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 21.17 | 20.24 |
| AT1G10340.1 | Thale cress | cytosol | 19.89 | 18.86 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 20.26 | 18.47 |
| AT5G50140.1 | Thale cress | plasma membrane | 17.88 | 18.32 |
| AT5G54700.1 | Thale cress | cytosol | 15.33 | 17.5 |
| AT5G54710.2 | Thale cress | cytosol | 20.44 | 17.42 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 19.53 | 17.37 |
| AT4G03460.1 | Thale cress | peroxisome | 19.53 | 17.04 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 19.53 | 16.41 |
| AT4G03450.1 | Thale cress | plasma membrane | 18.98 | 16.22 |
| AT4G05040.1 | Thale cress | cytosol | 16.79 | 16.08 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 19.71 | 15.21 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 18.8 | 15.08 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 17.7 | 14.48 |
| AT4G03480.1 | Thale cress | mitochondrion | 17.15 | 14.26 |
| AT4G14390.1 | Thale cress | plasma membrane | 17.88 | 14.12 |
| AT4G03440.1 | Thale cress | cytosol | 18.07 | 13.18 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:836129 | ProteinID:AED97273.1 | ArrayExpress:AT5G60070 | EnsemblPlantsGene:AT5G60070 |
| RefSeq:AT5G60070 | TAIR:AT5G60070 | RefSeq:AT5G60070-TAIR-G | EnsemblPlants:AT5G60070.1 | TAIR:AT5G60070.1 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.55633 | InterPro:At2g01680/At5g02620 | ProteinID:BAA96936.1 | ncoils:Coil |
| EMBL:DQ056727 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_200815.1 | PFAM:PF12796 |
| PFAM:PF13857 | PFAM:PF13962 | InterPro:PGG_dom | PO:PO:0007616 | PO:PO:0009046 | PO:PO:0025195 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 | PANTHER:PTHR24186:SF10 | UniProt:Q9LVG7 | SMART:SM00248 |
| SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI00000A71B0 | SEG:seg | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVG7]
Coordinates
chr5:-:24190264..24192894
Molecular Weight (calculated)
59578.1 Da
IEP (calculated)
8.460
GRAVY (calculated)
-0.047
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEASTSTPA PMAAKPTVVK KTMAKQFTGK REDSQLLSAV RRGDFSAVKE ILSNHMESED ELRDLLRKQN QCGETALYVA AEYGDADVVA ELIKYYDLED
101: AETKARNGFD PFHIAAKQGE LDVLRVLMEE HPELSMTVDL SNTTALHTAA AQGHVEVVEY LLEAAGSSLA AIAKSNGKTA LHSAARNGHA EVVKAIVAVE
201: PDTATRTDKK GQTPLHMAVK GQSIDVVVEL MKGHRSSLNM ADSKGNTALH VATRKGRIKI VELLLDNNET SPSTKAINRA GETPLDTAEK TGHPQIAAVL
301: KTRGVPSAKA INNTTRPNAA RELKQTVSDI KHEVHHQLEH ARETRKRVQG IAKRINKMHV EGLDNAINST TVVAVLIATV AFAAIFTVPG QYADELSSLL
401: PGQSLGEANI ADRPAFAIFF IFDSIALFIS LAVVVVQTSV VAIEHKAKKN MMAVINKLMW LACVLISVAF LALAFVVVGE EERWLAVGVT VFGATIMLTT
501: LGTMCYWVIM HRIEASNVRK SRKESMARSR QSGLLEFSGI LTKRMYAI
101: AETKARNGFD PFHIAAKQGE LDVLRVLMEE HPELSMTVDL SNTTALHTAA AQGHVEVVEY LLEAAGSSLA AIAKSNGKTA LHSAARNGHA EVVKAIVAVE
201: PDTATRTDKK GQTPLHMAVK GQSIDVVVEL MKGHRSSLNM ADSKGNTALH VATRKGRIKI VELLLDNNET SPSTKAINRA GETPLDTAEK TGHPQIAAVL
301: KTRGVPSAKA INNTTRPNAA RELKQTVSDI KHEVHHQLEH ARETRKRVQG IAKRINKMHV EGLDNAINST TVVAVLIATV AFAAIFTVPG QYADELSSLL
401: PGQSLGEANI ADRPAFAIFF IFDSIALFIS LAVVVVQTSV VAIEHKAKKN MMAVINKLMW LACVLISVAF LALAFVVVGE EERWLAVGVT VFGATIMLTT
501: LGTMCYWVIM HRIEASNVRK SRKESMARSR QSGLLEFSGI LTKRMYAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.