Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G50140.1 | Thale cress | plasma membrane | 40.0 | 35.89 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 39.38 | 32.98 |
| AT1G10340.1 | Thale cress | cytosol | 36.67 | 30.45 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 36.46 | 29.12 |
| VIT_09s0002g03920.t01 | Wine grape | cytosol | 32.92 | 27.62 |
| AT5G54710.2 | Thale cress | cytosol | 36.25 | 27.06 |
| KRH09919 | Soybean | cytosol, peroxisome, plasma membrane | 31.46 | 23.34 |
| VIT_09s0002g03910.t01 | Wine grape | plasma membrane | 32.92 | 21.91 |
| AT5G02620.5 | Thale cress | cytosol | 18.33 | 16.09 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 18.12 | 16.02 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 17.5 | 15.33 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 15.83 | 14.29 |
| AT1G05640.1 | Thale cress | cytosol | 18.33 | 14.04 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 17.5 | 13.68 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 18.33 | 13.29 |
| AT3G12360.1 | Thale cress | cytosol | 16.25 | 13.22 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 17.08 | 12.58 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 15.21 | 11.85 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 16.46 | 11.79 |
| AT4G03450.1 | Thale cress | plasma membrane | 15.21 | 11.39 |
| AT4G03460.1 | Thale cress | peroxisome | 14.79 | 11.31 |
| AT4G05040.1 | Thale cress | cytosol | 12.92 | 10.84 |
| AT4G14390.1 | Thale cress | plasma membrane | 15.42 | 10.66 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 15.0 | 10.14 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 13.54 | 9.52 |
| AT4G03440.1 | Thale cress | cytosol | 13.96 | 8.92 |
| AT4G03480.1 | Thale cress | mitochondrion | 11.46 | 8.35 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:835559 | ProteinID:AED96528.1 | ArrayExpress:AT5G54700 | EnsemblPlantsGene:AT5G54700 |
| RefSeq:AT5G54700 | TAIR:AT5G54700 | RefSeq:AT5G54700-TAIR-G | EnsemblPlants:AT5G54700.1 | TAIR:AT5G54700.1 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.55552 | UniProt:F4K1T9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_200281.1 |
| PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF18 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI0000162880 | SEG:seg | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4K1T9]
Coordinates
chr5:-:22223096..22225509
Molecular Weight (calculated)
52287.1 Da
IEP (calculated)
4.732
GRAVY (calculated)
0.126
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPPIFNAIR KNDEATFNQL IQEKPSVIEE RDKENNGESV LHLVTKIGHQ EFAKTIIGIC PSLSTPLDDI SEVENDLKLA ELVNNDGLTP LHCAAVSNSI
101: KILKVFSHKT PSSFDILTQP HNETVFHLAV RHKNLKAFKF MAQKVHLEKL LYKPDKYGNT VLHTAASLGS TSGLAAVDLL DKDDANFPSI ALKFGGESHK
201: EESVMHSEAL QNARNTITVV AILIASVTFA VGMNPPGGIY QESTSSKGKS VAAKTVAFKI FYVSNSIALF TSLWIVILLV SIIPFKPKSL KNVLVITHKM
301: MSVSVAALAT SYVAVGWIIL PHFEGTKWLL YTTLGISIVM RGGRYEAMPF RAGGSGELAL LAKLACLDEM SSLDELTCTD ELALLGELAD LDEQTSPDEL
401: TCVDELALLG ELADLDEQTS PDELTCVDEL ALLGELADLD EQTSPDELTC AILSPGLEKV PFPETFYSLF IPVRIVGYAR
101: KILKVFSHKT PSSFDILTQP HNETVFHLAV RHKNLKAFKF MAQKVHLEKL LYKPDKYGNT VLHTAASLGS TSGLAAVDLL DKDDANFPSI ALKFGGESHK
201: EESVMHSEAL QNARNTITVV AILIASVTFA VGMNPPGGIY QESTSSKGKS VAAKTVAFKI FYVSNSIALF TSLWIVILLV SIIPFKPKSL KNVLVITHKM
301: MSVSVAALAT SYVAVGWIIL PHFEGTKWLL YTTLGISIVM RGGRYEAMPF RAGGSGELAL LAKLACLDEM SSLDELTCTD ELALLGELAD LDEQTSPDEL
401: TCVDELALLG ELADLDEQTS PDELTCVDEL ALLGELADLD EQTSPDELTC AILSPGLEKV PFPETFYSLF IPVRIVGYAR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.