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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07932 Canola nucleus, plastid 93.32 95.66
CDX73985 Canola nucleus 94.46 95.24
Bra001304.1-P Field mustard nucleus 94.46 95.24
GSMUA_Achr5P07190_001 Banana cytosol 64.5 75.29
GSMUA_Achr11P... Banana cytosol 59.93 74.95
GSMUA_Achr9P04170_001 Banana cytosol 61.24 73.73
VIT_08s0040g02750.t01 Wine grape cytosol, peroxisome, plasma membrane 76.38 73.51
GSMUA_Achr7P15350_001 Banana cytosol, plastid 66.45 73.12
GSMUA_Achr6P34410_001 Banana cytosol 60.42 72.75
Solyc10g084550.1.1 Tomato plastid 67.59 70.94
GSMUA_Achr6P33220_001 Banana cytosol 63.03 70.75
AT3G12360.1 Thale cress cytosol 67.75 70.51
PGSC0003DMT400028722 Potato cytosol, plastid 69.22 69.67
EES03848 Sorghum cytosol 59.45 65.65
Zm00001d042948_P001 Maize cytosol 59.45 65.53
TraesCS3A01G354800.1 Wheat cytosol 58.79 65.05
Os01t0837000-01 Rice cytosol 58.63 64.75
HORVU3Hr1G087050.1 Barley cytosol 58.31 64.74
TraesCS3B01G387800.2 Wheat cytosol 58.31 64.62
TraesCS3D01G348800.2 Wheat cytosol 58.31 64.5
Os03t0281000-01 Rice nucleus, peroxisome, plasma membrane 67.1 60.41
TraesCS4B01G202400.2 Wheat cytosol, nucleus, plasma membrane 67.59 59.8
HORVU4Hr1G058480.2 Barley cytosol, nucleus, plasma membrane 67.43 59.57
TraesCS4D01G203300.1 Wheat cytosol, nucleus, plasma membrane 68.08 59.12
Zm00001d028679_P002 Maize cytosol, nucleus, plasma membrane 66.61 59.1
Zm00001d047772_P002 Maize plastid 66.78 58.91
EER95067 Sorghum cytosol, nucleus, plasma membrane 65.31 58.28
TraesCS4A01G102200.2 Wheat nucleus 67.59 57.48
AT1G07710.1 Thale cress cytosol, peroxisome, plasma membrane 38.6 43.65
AT5G60070.1 Thale cress cytosol, plastid 38.93 43.61
AT5G02620.5 Thale cress cytosol 34.53 38.76
AT2G01680.1 Thale cress cytosol, plasma membrane 32.9 37.97
AT1G05640.1 Thale cress cytosol 37.78 37.0
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 38.27 35.5
GSMUA_Achr9P03090_001 Banana cytosol 48.37 35.48
AT1G10340.1 Thale cress cytosol 20.03 21.28
AT1G34050.1 Thale cress cytosol, peroxisome, plasma membrane 19.54 20.94
AT2G24600.4 Thale cress cytosol, peroxisome, plasma membrane 19.54 19.97
AT5G54710.2 Thale cress cytosol 20.2 19.28
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 18.89 18.83
AT5G50140.1 Thale cress plasma membrane 15.47 17.76
AT5G54700.1 Thale cress cytosol 13.68 17.5
AT4G03460.1 Thale cress peroxisome 17.26 16.88
AT4G03450.1 Thale cress plasma membrane 17.1 16.38
AT4G05040.1 Thale cress cytosol 14.98 16.08
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 16.94 15.95
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 17.1 15.37
AT4G14390.1 Thale cress plasma membrane 15.96 14.12
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 15.15 13.88
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 15.96 13.8
AT4G03480.1 Thale cress mitochondrion 14.17 13.2
AT4G03440.1 Thale cress cytosol 15.31 12.52
Protein Annotations
Gene3D:1.25.40.20Gene3D:1.25.40.960MapMan:35.1EntrezGene:820112UniProt:A0A1I9LLR6ProteinID:ANM63524.1
ArrayExpress:AT3G09550EnsemblPlantsGene:AT3G09550RefSeq:AT3G09550TAIR:AT3G09550RefSeq:AT3G09550-TAIR-GEnsemblPlants:AT3G09550.2
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
RefSeq:NP_001325606.1PFAM:PF00023PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088
PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF107SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI0008490A77SEG:seg::::
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
Coordinates
chr3:+:2931102..2934354
Molecular Weight (calculated)
67260.2 Da
IEP (calculated)
10.175
GRAVY (calculated)
-0.244
Length
614 amino acids
Sequence
(BLAST)
001: MKKKKRQPKK RIEEEKELEP GMEKGLATDP TSPTGSTVAD LSPTPTPRKT LVLSNSGKAL MVSNSSKSLG LSNSGKRFDP TGKKKYVKQV TGRHNDTELH
101: LAAQRGDLAS VKQILSDIDS QITGTITGAD FDDEVAQIMT SVVNEVNELG ETPLFTAAEK GNIDVVKELL PYTTIESLMQ KNLSGFDALH IACSQGHRSI
201: VQLLLEHEPQ LSKTVAQSNA TPLVSAATRG HSEVVNELLA KDSSLLEISR SNGKNALHLA ARQGHVDIVR TLLDKDPQLA RRTDKKGQTS LHMAVKGVSS
301: QVVRLLLRAD PAIVMLPDKF GNTVLHIATR KKRAEIVNEL LQLPDTNVNA LTRDHKTAYD IAEGLTHSEE TAEIKEILSR CGALKANELN QPRDELRKTV
401: TEIKKDVHTQ LEQTRKTNKN VDGIAKELRK LHRAGINNAT NSVTVVAVLF ATVAFAAIFT VPGGDDDHGV AVMVHATSFK IFFIFNAIAL FTSLAVVVVQ
501: ITLVRGETKT ERRVVEVINK LMWLASVCTT VAFISSSYIV VGRRNRYAAV VVTVIGTVTM TGILSIMTYY VVKSKRTRIV RKKEKKKSAR NGTSSWHHAN
601: PSETESEVNP IYAI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.