Factsheet for GSMUA_Achr6P34410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	72.55	75.36
GSMUA_Achr9P04170_001	Banana	cytosol	73.92	73.92
GSMUA_Achr5P07190_001	Banana	cytosol	75.88	73.57
GSMUA_Achr6P33220_001	Banana	cytosol	74.9	69.84
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	75.88	69.35
Os01t0837000-01	Rice	cytosol	73.33	67.27
HORVU3Hr1G087050.1	Barley	cytosol	72.75	67.09
TraesCS3A01G354800.1	Wheat	cytosol	72.94	67.03
TraesCS3B01G387800.2	Wheat	cytosol	72.75	66.97
Zm00001d042948_P001	Maize	cytosol	73.14	66.97
EES03848	Sorghum	cytosol	72.75	66.73
TraesCS3D01G348800.2	Wheat	cytosol	72.55	66.67
KRG92972	Soybean	cytosol	73.92	64.44
Bra038714.1-P	Field mustard	cytosol, plastid	72.16	63.78
Bra034760.1-P	Field mustard	cytosol	72.94	63.59
AT3G12360.1	Thale cress	cytosol	73.33	63.39
CDY42145	Canola	cytosol	72.55	63.25
KRH36223	Soybean	cytosol	73.14	63.01
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	71.76	62.67
CDY50335	Canola	cytosol	72.35	62.65
Solyc05g054830.2.1	Tomato	nucleus	71.37	62.33
CDY50551	Canola	cytosol	71.96	62.31
VIT_13s0067g03880.t01	Wine grape	cytosol	71.76	62.14
CDY07932	Canola	nucleus, plastid	72.55	61.77
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.27	60.97
Bra001304.1-P	Field mustard	nucleus	72.55	60.76
CDX73985	Canola	nucleus	72.55	60.76
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	72.75	60.42
Solyc10g084550.1.1	Tomato	plastid	68.63	59.83
PGSC0003DMT400028722	Potato	cytosol, plastid	68.43	57.21
CDY08436	Canola	cytosol	72.94	56.36
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	20.98	45.73
GSMUA_Achr8P02120_001	Banana	cytosol	46.27	43.87
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	43.92	43.16
GSMUA_Achr6P33230_001	Banana	cytosol	47.06	40.47
GSMUA_Achr9P03090_001	Banana	cytosol	65.88	40.14
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	43.92	38.82
GSMUA_Achr7P23730_001	Banana	cytosol	22.16	35.65
GSMUA_Achr9P04150_001	Banana	plasma membrane	45.1	34.95
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	44.12	34.62
GSMUA_Achr9P02700_001	Banana	cytosol	14.71	19.48
GSMUA_Achr9P02740_001	Banana	cytosol	21.57	18.74
GSMUA_Achr9P02690_001	Banana	plasma membrane	20.78	18.4
GSMUA_Achr9P02720_001	Banana	cytosol	13.92	18.25
GSMUA_Achr7P12630_001	Banana	cytosol	21.57	16.9

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr6G34410_001
EnsemblPlants:GSMUA_Achr6P34410_001	EnsemblPlants:GSMUA_Achr6T34410_001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0TCN4
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000294DE81	SEG:seg

Description

Ankyrin repeat-containing protein At3g12360 [Source:GMGC_GENE;Acc:GSMUA_Achr6G34410_001]

Coordinates

chr6:+:33032315..33034075

Molecular Weight (calculated)

56487.5 Da

IEP (calculated)

10.535

GRAVY (calculated)

-0.154

Length

510 amino acids

Sequence
(BLAST)

001: MDKKKKKYVK QVTGRHNDTE LHLAARRGDL AAVRRILGDV VAQTNEFGET ALITAAEKGH LSVVAELLQY SDKENISRKN RSGFDAFHVA VKEGHRDIVQ
101: LLLGHDPTLG KTFGPSNVTP LISASARGHT EVIKQLLAQN FSMVEVAKRN GKNALHFAAR HGHVEAVKAL LDKDPQLARR TDVKGQTALH MAAKGTNHDV
201: IKALVDSDPA IVMLPDKNGN TALHVATRKK RAEIVNLLLL LPDTHVNALT RDHRTAYDIA EELPLSEEST YIKECLSRYG ALRAKELNQP RDELRKTVTE
301: IKKHVHTQLE QTRKTNKNVY GIAKELRKLH REGINNATNS VTVVAVLFAT VAFAAIFTVP GGSEDDGIAV AVHATAFRVF FIFNAIALFT SLAVVVVQIT
401: LVRRETKSER RVVEVINKLM WLASVCTTVA FLTSTYIVLG RRLQWAAILV TLIGGVIMAG VLGSMTYFVV KSKRIRKIRK KEKSSKRSGS TSWHHTSDFS
501: DSDFNPIYAI

Best Arabidopsis Sequence Match ( AT3G09550.1 )
(BLAST)

001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.