Factsheet for Zm00001d028679_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95067	Sorghum	cytosol, nucleus, plasma membrane	94.08	94.62
Zm00001d047772_P002	Maize	plastid	94.94	94.4
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	89.16	90.47
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	86.99	86.62
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	86.27	86.02
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	86.99	85.15
GSMUA_Achr11P...	Banana	cytosol	58.53	82.48
TraesCS4A01G102200.2	Wheat	nucleus	85.98	82.41
GSMUA_Achr5P07190_001	Banana	cytosol	62.28	81.94
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	65.61	81.36
GSMUA_Achr9P04170_001	Banana	cytosol	58.67	79.61
GSMUA_Achr6P33220_001	Banana	cytosol	61.42	77.7
CDY42145	Canola	cytosol	61.42	72.65
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	61.27	72.6
Bra034760.1-P	Field mustard	cytosol	61.27	72.48
Solyc05g054830.2.1	Tomato	nucleus	61.13	72.43
AT3G12360.1	Thale cress	cytosol	61.42	72.03
Bra038714.1-P	Field mustard	cytosol, plastid	59.83	71.75
CDY50551	Canola	cytosol	60.55	71.14
CDY50335	Canola	cytosol	60.55	71.14
VIT_13s0067g03880.t01	Wine grape	cytosol	60.4	70.97
KRG92972	Soybean	cytosol	59.68	70.6
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.88	70.38
Zm00001d042948_P001	Maize	cytosol	56.21	69.84
KRH36223	Soybean	cytosol	59.25	69.26
CDY07932	Canola	nucleus, plastid	58.81	67.95
CDX73985	Canola	nucleus	58.96	67.0
Bra001304.1-P	Field mustard	nucleus	58.96	67.0
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	59.1	66.61
Solyc10g084550.1.1	Tomato	plastid	55.64	65.81
PGSC0003DMT400028722	Potato	cytosol, plastid	56.94	64.59
CDY08436	Canola	cytosol	61.27	64.24
Zm00001d028680_P001	Maize	cytosol	34.83	42.88
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	18.79	41.67
Zm00001d051806_P001	Maize	cytosol, plasma membrane	31.65	41.63
Zm00001d017959_P001	Maize	plasma membrane	31.65	41.63
Zm00001d051244_P001	Maize	cytosol	7.37	41.46
Zm00001d031706_P001	Maize	cytosol	33.53	41.35
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	18.64	41.35
Zm00001d033803_P001	Maize	plasma membrane, vacuole	18.5	41.03
Zm00001d021169_P002	Maize	cytosol	33.67	40.66
Zm00001d006147_P002	Maize	cytosol	32.66	40.21
Zm00001d006142_P002	Maize	cytosol	32.66	40.21
Zm00001d030264_P001	Maize	plastid	10.26	26.69
Zm00001d025365_P001	Maize	cytosol	6.21	21.72
Zm00001d013327_P001	Maize	cytosol	17.05	20.81
Zm00001d000158_P001	Maize	mitochondrion	16.33	20.36
Zm00001d007725_P001	Maize	cytosol	16.04	20.0
Zm00001d007743_P001	Maize	cytosol	16.18	19.58
Zm00001d004738_P001	Maize	plasma membrane	17.05	17.43
Zm00001d021662_P002	Maize	plastid	16.47	16.55
Zm00001d037628_P002	Maize	plasma membrane	14.88	10.15

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100281058	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:B6SRU0	EMBL:EU955455	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONL96723.1
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000182B89D	EnsemblPlantsGene:Zm00001d028679
EnsemblPlants:Zm00001d028679_P002	EnsemblPlants:Zm00001d028679_T002	SEG:seg	:	:	:

Description

Protein binding protein

Coordinates

chr1:+:42783797..42786862

Molecular Weight (calculated)

74406.5 Da

IEP (calculated)

10.328

GRAVY (calculated)

-0.143

Length

692 amino acids

Sequence
(BLAST)

001: MAADSGKGMA DLEIGLASPG SERAPSPASS AGAYGERPDQ SPPRVAKRPG LVMSFSGKRL DQSPAGSPSP SPSSSRPVLV MSHSSNRLDQ SPARPVLVMS
101: RSSNRLDQSS PASSPAAVKG PALVMSGSSN RLDSSHPSPS PTAAAAAAPL LVLSNSGKRM DQAGRKKYVK QVTGRHNDTE LHLAAQRGDL EAVRQIIAEI
201: DAQMTGTGEE FDSDVAEIRA AIVNEANEME ATALLIAAEK GFLDIVVELL KHSDKDSLTR KNKSGFDALH VAAKEGHRDI VKVLLDHDPS LGKTFGQSNV
301: TPLITAAIRG HIEVVNLLLE RVSGLVELSK ANGKNALHFA ARQGHVEIVE ALLHADTQLA RRTDKKGQTA LHMAVKGTSP EVVQALVNAD PAIVMLPDRN
401: GNLALHVATR KKRSEIVNVL LLLPDMNVNA LTRDRKTAFD IAEGLPLSEE SQEIKECLSR AGAVRANDLN QPRDELRKTV TEIKKDVHTQ LEQARKTNKN
501: VYGIAKELRK LHREGINNAT NSVTVVAVLF ATVAFAAIFT VPGGNANDGV AVAVHATAFK VFFIFNAVAL FTSLAVVVVQ ITLVRGETKA ERRVVEIINK
601: LMWLASVCTT VAFISSSYIV VGRHFRWAAL LVTLIGGVIM AGVLGTMTYY VVKSKRTRKI RKKVKSTRRS GSSSWQHNSE FSDSEIDRIY AI

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.