CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G10340.1	Thale cress	cytosol	77.7	78.37
CDY20943	Canola	cytosol	76.16	77.22
CDY20639	Canola	cytosol, peroxisome, plasma membrane	59.86	76.2
CDY69308	Canola	plasma membrane	69.47	68.3
CDY39673	Canola	plasma membrane	67.58	65.67
VIT_09s0002g03920.t01	Wine grape	cytosol	36.02	36.71
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	37.39	33.69
VIT_09s0002g03910.t01	Wine grape	plasma membrane	39.11	31.62
CDY20642	Canola	nucleus	60.38	24.67
CDY55069	Canola	cytosol, peroxisome, plasma membrane	10.12	24.58
CDX93618	Canola	cytosol	11.32	22.92
CDX95126	Canola	cytosol	20.75	22.41
CDY58363	Canola	cytosol	20.75	21.76
CDX88738	Canola	plastid	19.55	21.27
CDY15549	Canola	cytosol	20.24	21.15
CDX71059	Canola	plastid	19.73	21.06
CDY07932	Canola	nucleus, plastid	20.93	20.37
CDY70132	Canola	cytosol	18.18	20.11
CDY10435	Canola	cytosol	18.18	20.11
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	21.27	19.94
CDX73985	Canola	nucleus	20.75	19.87
CDY19113	Canola	cytosol	21.1	19.49
CDY50335	Canola	cytosol	19.55	19.35
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	5.15	19.35
CDY50551	Canola	cytosol	19.38	19.19
CDY42145	Canola	cytosol	19.21	19.15
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	20.41	18.98
CDX86566	Canola	cytosol	18.52	18.72
CDY59983	Canola	cytosol	9.61	18.54
CDX99605	Canola	cytosol	8.92	18.25
CDY36249	Canola	cytosol	16.64	18.13
CDX73200	Canola	cytosol	9.26	17.88
CDY17652	Canola	cytosol	16.3	17.82
CDY08436	Canola	cytosol	19.04	16.82
CDY30009	Canola	cytosol, plasma membrane, plastid	16.81	16.61
CDY58683	Canola	cytosol	8.58	16.39
CDX74181	Canola	cytosol, peroxisome, plasma membrane	15.95	16.09
CDY40658	Canola	cytosol, peroxisome, plasma membrane	15.61	15.77
CDY40662	Canola	plasma membrane	15.44	15.6
CDY16445	Canola	cytosol, plasma membrane, plastid	14.75	15.22
CDY35767	Canola	cytosol, peroxisome, plasma membrane	15.95	15.2
CDY48208	Canola	cytosol	16.12	15.09
CDY18182	Canola	cytosol, peroxisome, plasma membrane	14.58	15.07
CDY42176	Canola	cytosol, peroxisome, plasma membrane	16.3	14.68
CDY45914	Canola	cytosol	10.46	13.9
CDY48209	Canola	cytosol, peroxisome, plasma membrane	15.09	12.46
CDY21967	Canola	plasma membrane	15.27	11.79
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	13.38	11.02
CDY21969	Canola	nucleus	5.83	10.15
CDY58682	Canola	cytosol	1.2	8.33
CDY16446	Canola	cytosol	0.17	7.14

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078G288	UniProt:A0A078G288	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY20635	ProteinID:CDY20635	ProteinID:CDY20635.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00012815001	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403
TMHMM:TMhelix	UniParc:UPI0004EEF35C	SEG:seg	:	:	:

Description

BnaC08g14230DBnaC08g14230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G288]

Coordinates

chrLK032110:-:377288..381395

Molecular Weight (calculated)

63368.2 Da

IEP (calculated)

7.623

GRAVY (calculated)

0.169

Length

583 amino acids

Sequence
(BLAST)

001: MQPIFHAVLQ NDLPAFMSLV EERDSTLEEK NNEEHLNDTV LHMAAGLGHG ELVSKIIDRR PSLVCSRNAE GNTPLHLAAL LGDVNIVSQM LETGLEACTA
101: RNNKNDTPLH LACRSISTEA AKLVAEKTNS VDLGELNFAI SSGSTGVAKI ILERFPDLAR EEAWPVEGGS LSTLLHHACD RGDLELTRIL LALDQRLDEA
201: INTNGLSPLH LAVLRGSVVI LEQFLNKAPL SFISLTPSKE TVFHLAAKNK TMDAFVFMAE RLGSNSQILL QQTDENGNTV LHTAASVACG APLIRYIIGK
301: KMVDISNKNK MGFAACHLLP QDAQDFELLS SWLRFDTEPS GVLDPESIVV EDPSSPLIGK PLRACVIRLL TLIGINTTEL AKRKRSKQSE VEKGPEGLEY
401: AMHIEALQNA RNTIAIVAVL IASVAYAGGI HPPGGVYQDG PWIGKSTVGK TTAFKVFAIC NNIALFTSLA IVILLVSIIP YKRKPLKRLL VATHRMMWVS
501: VGFMATAYVA AAWVTIPHYR GTRWVFPAIV AVAVGALMVL FLYLGVEAIV HWFKKKARVG LTPSSARTCS DLAVSGKSGY FAY

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.