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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004738_P001 Maize plasma membrane 72.89 71.49
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 62.05 60.95
Os11t0182900-00 Rice plastid 37.2 53.46
HORVU5Hr1G084850.1 Barley cytosol 28.77 52.33
HORVU1Hr1G017320.2 Barley cytosol 22.89 51.35
TraesCS5B01G439300.1 Wheat cytosol, peroxisome, plasma membrane 47.74 51.21
TraesCS7D01G043800.1 Wheat plastid 35.24 51.2
TraesCS5A01G436200.1 Wheat plasma membrane 49.1 50.78
TraesCS5D01G343400.1 Wheat cytosol 49.55 50.77
TraesCS5A01G339200.1 Wheat plasma membrane 49.55 50.62
TraesCS5A01G338100.1 Wheat cytosol 37.2 50.61
HORVU0Hr1G030080.2 Barley plasma membrane 48.95 50.54
HORVU3Hr1G017090.2 Barley cytosol 48.8 49.69
TraesCS4A01G434700.1 Wheat plasma membrane 48.34 49.69
TraesCS5B01G336900.1 Wheat cytosol 47.74 49.69
TraesCS5B01G337600.1 Wheat plasma membrane 49.1 49.1
TraesCS5D01G443900.1 Wheat mitochondrion 49.85 49.04
TraesCS5D01G342600.1 Wheat cytosol 50.0 48.19
HORVU7Hr1G008610.5 Barley cytosol, plastid 39.16 48.15
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 43.52 44.19
GSMUA_Achr9P02700_001 Banana cytosol 21.39 36.88
GSMUA_Achr9P02720_001 Banana cytosol 21.23 36.25
EER96593 Sorghum plasma membrane 23.19 31.82
KXG36379 Sorghum cytosol 18.22 30.33
GSMUA_Achr9P02690_001 Banana plasma membrane 25.9 29.86
GSMUA_Achr9P02740_001 Banana cytosol 25.6 28.96
KXG36384 Sorghum cytosol 17.32 28.82
OQU89270 Sorghum cytosol 23.49 27.76
GSMUA_Achr7P12630_001 Banana cytosol 27.11 27.65
OQU83144 Sorghum cytosol 16.57 27.36
PGSC0003DMT400071072 Potato cytosol 15.21 27.3
VIT_05s0165g00060.t01 Wine grape cytosol 10.24 26.77
OQU80298 Sorghum mitochondrion, plastid 28.01 26.76
EER90917 Sorghum cytosol, peroxisome, plasma membrane 22.14 26.44
EER97319 Sorghum plastid 26.2 26.36
VIT_05s0124g00720.t01 Wine grape cytosol 14.91 26.05
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 24.55 26.0
VIT_14s0081g00350.t01 Wine grape cytosol 20.78 25.84
VIT_05s0165g00010.t01 Wine grape nucleus 17.92 25.81
VIT_05s0124g00670.t01 Wine grape cytosol 22.29 25.56
VIT_12s0059g00130.t01 Wine grape cytosol 14.61 25.46
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 23.34 25.16
OQU84849 Sorghum plasma membrane 24.1 25.12
VIT_12s0059g00060.t01 Wine grape cytosol 19.43 25.1
OQU78058 Sorghum plasma membrane 23.64 25.08
VIT_19s0014g05330.t01 Wine grape extracellular 21.84 25.04
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 22.89 24.84
EES18294 Sorghum plasma membrane 25.9 24.61
VIT_05s0102g00030.t01 Wine grape cytosol 21.69 24.41
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 23.19 24.33
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 23.64 24.08
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 20.78 23.96
VIT_12s0059g00090.t01 Wine grape cytosol 12.95 23.96
EER90916 Sorghum cytosol 20.33 23.89
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 20.93 23.88
VIT_05s0165g00140.t01 Wine grape cytosol 16.72 23.82
VIT_12s0059g00150.t01 Wine grape cytosol 13.86 23.77
Bra034209.1-P Field mustard cytosol 22.29 23.72
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 18.67 23.71
AT4G03460.1 Thale cress peroxisome 22.29 23.57
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.76 23.56
VIT_12s0059g00110.t01 Wine grape cytosol 13.7 23.51
AT4G05040.1 Thale cress cytosol 20.18 23.43
VIT_05s0102g00050.t01 Wine grape nucleus 21.08 23.29
Solyc07g061750.2.1 Tomato cytosol 20.33 23.28
OQU84108 Sorghum cytosol, nucleus, plasma membrane 26.66 23.26
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 17.92 23.15
EER88274 Sorghum cytosol 26.36 23.09
VIT_05s0124g00460.t01 Wine grape cytosol 9.34 22.96
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 23.04 22.94
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 20.18 22.83
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 22.89 22.82
VIT_05s0165g00290.t01 Wine grape cytosol 20.63 22.8
Bra023774.1-P Field mustard plasma membrane 20.93 22.79
OQU83139 Sorghum cytosol 7.68 22.77
EER89595 Sorghum cytosol 12.95 22.75
EER87702 Sorghum nucleus 25.15 22.69
VIT_12s0028g04020.t01 Wine grape plasma membrane 10.84 22.64
Bra033416.1-P Field mustard cytosol 19.13 22.64
VIT_14s0081g00390.t01 Wine grape cytosol 17.47 22.61
OQU83151 Sorghum cytosol 4.97 22.6
VIT_12s0028g04010.t01 Wine grape cytosol 15.21 22.54
VIT_14s0081g00420.t01 Wine grape cytosol 20.18 22.52
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 13.7 22.47
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 23.04 22.4
AT4G03450.1 Thale cress plasma membrane 21.54 22.31
EES07299 Sorghum cytosol, plasma membrane 17.77 22.31
EES03848 Sorghum cytosol 18.67 22.3
VIT_13s0047g01220.t01 Wine grape plasma membrane 20.78 22.26
VIT_05s0029g01420.t01 Wine grape cytosol 21.99 22.26
Bra000823.1-P Field mustard plasma membrane 14.76 22.07
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 17.17 22.05
VIT_05s0029g01540.t01 Wine grape plasma membrane 22.14 22.04
VIT_14s0081g00370.t01 Wine grape cytosol 11.3 21.99
VIT_12s0059g00050.t01 Wine grape plasma membrane 21.39 21.95
VIT_12s0028g03990.t01 Wine grape cytosol 19.58 21.92
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 19.58 21.89
EER95066 Sorghum cytosol 18.67 21.87
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 22.29 21.86
VIT_05s0029g01490.t01 Wine grape cytosol 15.66 21.85
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 20.18 21.72
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 21.54 21.34
AT4G03480.1 Thale cress mitochondrion 20.93 21.09
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 22.74 21.06
EES15259 Sorghum cytosol 17.77 21.0
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 22.29 20.99
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 21.84 20.74
VIT_14s0081g00360.t01 Wine grape cytosol 13.1 20.71
EER87700 Sorghum cytosol 24.7 20.35
OQU83143 Sorghum cytosol 10.69 20.34
EER97054 Sorghum cytosol 17.17 20.28
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 21.69 20.28
AT4G14390.1 Thale cress plasma membrane 20.78 19.88
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 22.14 19.14
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 15.66 18.91
AT4G03440.1 Thale cress cytosol 21.08 18.64
EER95067 Sorghum cytosol, nucleus, plasma membrane 18.52 17.88
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 21.39 17.25
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 21.23 15.91
VIT_12s0059g00120.t01 Wine grape cytosol 18.52 14.91
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 17.17 12.21
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1B6PQI5InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:KXG27928ProteinID:KXG27928ProteinID:KXG27928.1
PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF116SMART:SM00248EnsemblPlantsGene:SORBI_3005G063900SUPFAM:SSF48403TMHMM:TMhelix
UniParc:UPI00081ADEEFSEG:seg::::
Description
hypothetical protein
Coordinates
chr5:+:7006513..7020253
Molecular Weight (calculated)
70737.1 Da
IEP (calculated)
8.149
GRAVY (calculated)
0.132
Length
664 amino acids
Sequence
(BLAST)
001: MDPQQQSIIQ LAAGASPANP ALWPMQLPQC GHERLVGNNM RPSLYLAVFK GSMAEVEKLL PQQHAAALDC EATGIVMHGQ CDILELTAER STALHVAAEQ
101: GHDELIRELY HRFRDQGLLS RRNSALDSPL HCAARAGHDR AVNVLVEVAR DCGENILGCK NEAGDTALHL AARHGHGATV EVLVSAAAGP AAELNNAGVS
201: PLYLAVISGS LRAVRTIITK CKDDASSAGP NSQNALHAAV FQSSEMVDVL LGWRPALADQ VDSSGSSPLH FASSDGDLSI VRAILRAGPP GTVYKKDSSG
301: LSALHVAARM GHHRVIKEIL GSCPEAADLR DGDGGTFIHA AAREKRSSVV SLATKDPMLR GLLDAQDSDG NTPLHLAVAA GSTGIVEDLL HEGKVRANVL
401: NNDGDTAFDL AAGSTTSFFN MVSLVVALVA YGAQLRPQRQ DQLKQWGGRD KVRKGIQNTS DSLAVVAGLI VAAAFAAGFN LPGGYGDNGK ANLRGDLVFK
501: SFLVLNTGAV TTSVVAVILL VYGKAASHSA GSWKSFAAAL QLLWMSLVFM MLAFQAALLS VATTKSLTYG FQVVYTCILV LQVWIVKWLG VTLTRLHTIW
601: RFHSQGRKHF DVKRQYPFVK ATVLNLQLFI ATSFLISIGF QAIFGLNRRS MDTSIAPSPS PLCF
Best Arabidopsis Sequence Match ( AT4G03500.3 )
(BLAST)
001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.