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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU83139 Sorghum cytosol 27.86 50.0
EER89595 Sorghum cytosol 46.77 49.74
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 67.66 45.79
TraesCS3B01G599100.1 Wheat cytosol 44.53 44.42
HORVU6Hr1G000310.2 Barley cytosol, peroxisome 59.45 41.86
TraesCS3A01G529700.1 Wheat cytosol, peroxisome, plasma membrane 60.45 41.61
TraesCSU01G140300.1 Wheat cytosol, peroxisome, plasma membrane 58.21 41.56
HORVU3Hr1G115640.1 Barley plastid 59.95 41.27
HORVU3Hr1G115720.2 Barley cytosol, peroxisome, plasma membrane 59.7 41.1
Os11t0251400-02 Rice cytosol, peroxisome, plasma membrane 59.45 40.92
TraesCS1D01G379500.2 Wheat cytosol 58.21 40.0
TraesCS3D01G533500.1 Wheat cytosol 58.71 40.0
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 54.23 39.64
HORVU3Hr1G115700.1 Barley cytosol, plastid 56.97 39.41
TraesCS3D01G535100.1 Wheat cytosol, peroxisome, plasma membrane 32.34 38.35
HORVU3Hr1G115780.11 Barley plastid 58.96 37.74
HORVU3Hr1G115520.15 Barley mitochondrion, peroxisome, plastid 56.72 37.13
TraesCS3D01G455500.1 Wheat cytosol 55.47 37.1
TraesCS3A01G529300.1 Wheat plasma membrane 43.03 36.65
OQU83151 Sorghum cytosol 12.94 35.62
TraesCS3D01G534600.1 Wheat plasma membrane 53.48 35.48
HORVU4Hr1G089710.1 Barley cytosol, extracellular 15.67 34.24
TraesCS3B01G584200.1 Wheat plasma membrane 40.55 32.6
TraesCS3B01G599300.1 Wheat plasma membrane, vacuole 16.67 31.6
OQU83143 Sorghum cytosol 26.12 30.09
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 60.45 26.02
EER90917 Sorghum cytosol, peroxisome, plasma membrane 32.09 23.2
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 21.89 21.73
EER90916 Sorghum cytosol 30.1 21.42
KXG36379 Sorghum cytosol 20.9 21.05
GSMUA_Achr9P02720_001 Banana cytosol 20.15 20.82
VIT_14s0081g00350.t01 Wine grape cytosol 27.36 20.6
VIT_05s0124g00670.t01 Wine grape cytosol 29.6 20.55
PGSC0003DMT400071072 Potato cytosol 18.91 20.54
GSMUA_Achr9P02700_001 Banana cytosol 19.65 20.52
GSMUA_Achr7P12630_001 Banana cytosol 33.08 20.43
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 29.1 20.31
VIT_05s0165g00060.t01 Wine grape cytosol 12.19 19.29
VIT_19s0014g05330.t01 Wine grape extracellular 27.61 19.17
GSMUA_Achr9P02740_001 Banana cytosol 27.86 19.08
GSMUA_Achr9P02690_001 Banana plasma membrane 27.11 18.92
OQU89270 Sorghum cytosol 26.37 18.86
KXG36384 Sorghum cytosol 18.41 18.55
Bra023774.1-P Field mustard plasma membrane 28.11 18.52
VIT_14s0081g00420.t01 Wine grape cytosol 27.11 18.32
VIT_05s0124g00460.t01 Wine grape cytosol 12.19 18.15
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 27.61 18.14
VIT_14s0081g00390.t01 Wine grape cytosol 23.13 18.13
Solyc07g061750.2.1 Tomato cytosol 26.12 18.1
VIT_12s0059g00060.t01 Wine grape cytosol 23.13 18.09
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 26.12 18.04
Bra033416.1-P Field mustard cytosol 24.88 17.83
VIT_05s0165g00140.t01 Wine grape cytosol 20.65 17.81
VIT_05s0165g00010.t01 Wine grape nucleus 20.4 17.79
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 22.64 17.7
VIT_12s0028g04020.t01 Wine grape plasma membrane 13.93 17.61
VIT_12s0028g04010.t01 Wine grape cytosol 19.4 17.41
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 27.36 17.38
VIT_12s0028g03990.t01 Wine grape cytosol 25.62 17.37
VIT_05s0102g00030.t01 Wine grape cytosol 25.37 17.29
VIT_05s0124g00720.t01 Wine grape cytosol 16.17 17.11
AT4G03460.1 Thale cress peroxisome 26.62 17.04
EES15259 Sorghum cytosol 23.38 16.73
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 25.62 16.72
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 28.11 16.72
OQU80298 Sorghum mitochondrion, plastid 28.86 16.69
VIT_05s0102g00050.t01 Wine grape nucleus 24.88 16.64
VIT_05s0165g00290.t01 Wine grape cytosol 24.88 16.64
KXG27928 Sorghum plasma membrane 27.36 16.57
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 21.14 16.44
VIT_14s0081g00370.t01 Wine grape cytosol 13.93 16.42
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 27.11 16.37
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 26.62 16.36
OQU84849 Sorghum plasma membrane 25.87 16.33
AT4G05040.1 Thale cress cytosol 23.13 16.26
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 26.37 16.26
EER97319 Sorghum plastid 26.62 16.21
Bra034209.1-P Field mustard cytosol 25.12 16.19
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 28.11 16.17
VIT_05s0029g01420.t01 Wine grape cytosol 26.37 16.16
VIT_13s0047g01220.t01 Wine grape plasma membrane 24.88 16.13
VIT_12s0059g00050.t01 Wine grape plasma membrane 25.87 16.07
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 20.9 16.06
VIT_05s0029g01490.t01 Wine grape cytosol 18.91 15.97
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 23.13 15.84
EER96593 Sorghum plasma membrane 18.91 15.7
EER97054 Sorghum cytosol 21.89 15.66
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 26.37 15.66
EER87702 Sorghum nucleus 28.61 15.62
VIT_05s0029g01540.t01 Wine grape plasma membrane 25.87 15.59
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 25.87 15.59
EES18294 Sorghum plasma membrane 26.87 15.45
VIT_14s0081g00360.t01 Wine grape cytosol 15.92 15.24
VIT_12s0059g00130.t01 Wine grape cytosol 14.43 15.22
EER88274 Sorghum cytosol 28.61 15.17
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 23.38 14.99
VIT_12s0059g00150.t01 Wine grape cytosol 14.43 14.99
AT4G03450.1 Thale cress plasma membrane 23.88 14.98
AT4G03480.1 Thale cress mitochondrion 24.38 14.87
OQU78058 Sorghum plasma membrane 23.13 14.86
OQU84108 Sorghum cytosol, nucleus, plasma membrane 28.11 14.85
AT4G14390.1 Thale cress plasma membrane 25.62 14.84
EER87700 Sorghum cytosol 29.6 14.76
VIT_12s0059g00110.t01 Wine grape cytosol 14.18 14.73
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.93 14.42
EES07299 Sorghum cytosol, plasma membrane 18.91 14.37
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 23.63 14.18
EER95066 Sorghum cytosol 19.65 13.93
EES03848 Sorghum cytosol 18.91 13.67
VIT_12s0059g00090.t01 Wine grape cytosol 12.19 13.65
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 23.88 13.62
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 25.87 13.54
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 24.13 13.53
Bra000823.1-P Field mustard plasma membrane 14.93 13.51
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 20.65 13.45
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 23.63 13.38
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 25.37 12.39
AT4G03440.1 Thale cress cytosol 23.13 12.38
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 20.65 12.15
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 25.37 11.51
EER95067 Sorghum cytosol, nucleus, plasma membrane 19.4 11.34
VIT_12s0059g00120.t01 Wine grape cytosol 21.39 10.42
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1Z5RHE1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU83144ProteinID:OQU83144ProteinID:OQU83144.1
PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF50SMART:SM00248EnsemblPlantsGene:SORBI_3005G083400SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI000B8B9B70
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:+:11190747..11193164
Molecular Weight (calculated)
43538.4 Da
IEP (calculated)
6.909
GRAVY (calculated)
0.060
Length
402 amino acids
Sequence
(BLAST)
001: MERLVEASVG GHVAEMKHLH LRDPGVLLGT TPQGNTCLHI AAIHGHEVFC KEVQALKPSL LAAVNSDGET PLLAVMASGH VSIASVLLRC CRDQQLSETI
101: LKQDKRGCNA LHHAIRCGHR ELALELIKAE PALSHAVNEY GESPMFAAVT RNYEDVFDKL LEIPNSAHGG ACGWNALHAA VRKGNSGYQI SGPSIPLLDY
201: AAFNGHVDVA RELLKHCPDA PCCETTGSTC LHRAVWSEQP EFVKFVLGSP QLQKLVYMRE GECGDTALHL AVHKCNPKMV ALLLNQSIDV TVFNKAGYSA
301: NWLLSTDRAK TLNWHVKDQV TDISRKDIKS LTQTYTGNTS LVAILIATIT FAAAFTLPGG YSTDPGNEGL PIVAREIAFK AFLFSDTLAM CSSFAVAFIY
401: AL
Best Arabidopsis Sequence Match ( AT4G03500.1 )
(BLAST)
001: MKNESRTSEE ISKLGIFSGV GFSMGRPDVH LDRRVAENHQ AIPRNNVRST PSLDLSTLFD ETSETKPMDP KTMAAVRAGK ENYLRSNNSY ISVAPTLVND
101: RGNTILHLAA SSGHVSLVRY IIQKCPGLLL KSNMMGEVAL HLAAEAGHLD VVWNLIDFIN DISCTNLPVA KRIYFAKNKN QDTALHVALK GKHEVVASYL
201: VSAAKSLSFV ANRDGFSPLY LAIEAGHTSL VTTMCHGTNE LSSKVGGRSI VHAALKANRK DILDALLSKD ASLINLRDEG RTSLSFGASI GYYQGFSYLF
301: DKNRDKVYVS DDDGLFPTHM AAKYGHVQIL EEILKHCPEA IELLDRDGQN ILHLAAKYGK LKVIKFILSC CKDKNKKKLI NEQDVNGNTP LHLATINWHP
401: KVVSMFTWDH RVDLKKRNYI GFTALDVAEE NIDSSYIVHQ RLTWMALINA GAPKSSTPIT ENLRSFKKPD GGKYKDRVNT LMLVATLVAT MTFTAGFTLP
501: GGYNDSFPHL GMAVLAKRTA FQVFLVCDTL AMYSSIITIV ALIWAQLGDL SIILKAFNIA LPFLGLALTS MSIAFMAGTY VAVSHLPLLG YFVLGIGIIF
601: LLVLLLLLVP YVSPYAHAQP LLRHIFYYPY FLKLLAAGDN KNIVDVYTAS DE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.