Factsheet for VIT_04s0008g03530.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g03840.t01	Wine grape	cytosol	66.09	64.54
PGSC0003DMT400031466	Potato	cytosol, peroxisome, plasma membrane	61.1	63.39
PGSC0003DMT400011032	Potato	cytosol, peroxisome, plasma membrane	57.49	60.73
Solyc08g066770.2.1	Tomato	cytosol	63.17	60.46
PGSC0003DMT400011023	Potato	cytosol	63.68	59.97
VIT_09s0002g03920.t01	Wine grape	cytosol	38.38	38.99
VIT_09s0002g03910.t01	Wine grape	plasma membrane	40.45	32.59
VIT_08s0040g02760.t01	Wine grape	cytosol	25.99	27.91
VIT_12s0059g00110.t01	Wine grape	cytosol	17.38	26.1
VIT_05s0094g01320.t01	Wine grape	cytosol	25.82	25.68
VIT_12s0059g00150.t01	Wine grape	cytosol	16.87	25.32
VIT_12s0059g00130.t01	Wine grape	cytosol	16.52	25.2
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	23.41	25.09
VIT_13s0067g03880.t01	Wine grape	cytosol	25.3	24.96
VIT_12s0028g04020.t01	Wine grape	plasma membrane	13.08	23.9
VIT_12s0028g03960.t01	Wine grape	plasma membrane	17.04	23.8
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.99	23.67
VIT_12s0059g00090.t01	Wine grape	cytosol	14.46	23.4
VIT_01s0011g05700.t01	Wine grape	cytosol	21.17	23.12
VIT_14s0081g00350.t01	Wine grape	cytosol	21.17	23.03
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.79	22.37
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.0	20.96
VIT_14s0081g00390.t01	Wine grape	cytosol	18.07	20.47
VIT_14s0081g00360.t01	Wine grape	cytosol	14.63	20.24
VIT_12s0059g00060.t01	Wine grape	cytosol	17.9	20.23
VIT_12s0059g00050.t01	Wine grape	plasma membrane	22.38	20.09
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	17.73	19.69
VIT_05s0124g00670.t01	Wine grape	cytosol	19.62	19.69
VIT_05s0165g00140.t01	Wine grape	cytosol	15.66	19.53
VIT_19s0014g05330.t01	Wine grape	extracellular	18.93	19.0
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	21.51	18.74
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.17	18.47
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	21.34	18.32
VIT_12s0028g03990.t01	Wine grape	cytosol	18.42	18.04
VIT_05s0102g00030.t01	Wine grape	cytosol	18.07	17.8
VIT_14s0081g00420.t01	Wine grape	cytosol	18.07	17.65
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	17.73	17.55
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.11	17.54
VIT_13s0047g01220.t01	Wine grape	plasma membrane	18.42	17.26
VIT_05s0102g00050.t01	Wine grape	nucleus	17.73	17.14
VIT_05s0165g00010.t01	Wine grape	nucleus	13.6	17.14
VIT_05s0165g00290.t01	Wine grape	cytosol	17.56	16.97
VIT_05s0124g00720.t01	Wine grape	cytosol	11.02	16.84
VIT_05s0029g01540.t01	Wine grape	plasma membrane	18.93	16.49
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.79	16.45
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	23.06	16.28
VIT_05s0029g01420.t01	Wine grape	cytosol	18.24	16.16
VIT_05s0165g00060.t01	Wine grape	cytosol	6.88	15.75
VIT_12s0028g04010.t01	Wine grape	cytosol	12.05	15.62
VIT_05s0029g01490.t01	Wine grape	cytosol	12.74	15.55
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	21.86	14.33
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	17.38	13.15
VIT_12s0059g00120.t01	Wine grape	cytosol	16.52	11.64
VIT_05s0124g00460.t01	Wine grape	cytosol	5.34	11.48
VIT_14s0081g00370.t01	Wine grape	cytosol	6.37	10.85

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100244024	wikigene:100244024	EntrezGene:100257768	wikigene:100257768	MapMan:35.1
EMBL:AM430844	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:CAN66947	ProteinID:CAN66947.1
ProteinID:CAN66949	ProteinID:CAN66949.1	ProteinID:CCB46708	ProteinID:CCB46708.1	ncoils:Coil	UniProt:F6H3E4
EMBL:FN595231	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EntrezGene:LOC100244024	wikigene:LOC100244024	EntrezGene:LOC100257768	wikigene:LOC100257768
PFAM:PF12796	PFAM:PF13857	PFAM:PF13962	InterPro:PGG_dom	PRINTS:PR01415	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF117	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI000210A965	ArrayExpress:VIT_04s0008g03530	EnsemblPlantsGene:VIT_04s0008g03530	EnsemblPlants:VIT_04s0008g03530.t01	RefSeq:XP_002283934	RefSeq:XP_002283934.1
RefSeq:XP_003631824	RefSeq:XP_003631824.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:2889364..2892149

Molecular Weight (calculated)

64052.8 Da

IEP (calculated)

9.020

GRAVY (calculated)

-0.138

Length

581 amino acids

Sequence
(BLAST)

001: MDRRLFEAVL KGDVSSFLSL AQEEEDIIKQ VVPGSLNTVL HLAARFGHLE LASEIVNLRP ELSSAENEKL ETPLHEACRE GRVEIVALLM KVDQWIAPKV
101: NRNDESVLFV GCERGKLDVV KHLLVNHSWL LMLELDAPTT SLHAAASGGH TGCTPLHLAC SKGHLEITRE LLRLDPDLTS LQDNDGRTPL HWAAMKGRVN
201: IIDEILSVSL QSAEMRTEHG ETVLHLAVKN NQYEAVKYLT ETLNISQLLN TPDSDGNTIL HLATAGKLTT TVLYLLKLGV NVNALNRKGY TPLDVVETDA
301: SNSGSLVVVP ALLEAGAKRC DQLPPVSQEI QTITEPSSGR LYPTSPNLPP PWPKRPPESP AKHHRRKHQR RREKQLEQQT EGLRNARNTI TVVAVLIATV
401: TFSAGVNPPG GFNQSSGKAI MGKKTPFKVF MVCNILALFL SLGIVIVLVS IIPFRRKSMM KLLISTHKVM WMSVTFMAAA YIAATWTILP GGPSTKWVLV
501: TLVSIGGGCT MTICVGLGVL LIQHWLRKWE WKKTKRKNKD GSPHSSMNSR VGEMQTIKRG DHDSTSNSDV DSSEKGGYHL Y

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.