Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011032 | Potato | cytosol, peroxisome, plasma membrane | 83.21 | 84.73 |
| Solyc08g066770.2.1 | Tomato | cytosol | 91.43 | 84.35 |
| PGSC0003DMT400011023 | Potato | cytosol | 92.5 | 83.95 |
| VIT_04s0008g03530.t01 | Wine grape | cytosol | 63.39 | 61.1 |
| VIT_04s0008g03840.t01 | Wine grape | cytosol | 56.07 | 52.77 |
| PGSC0003DMT400061439 | Potato | cytosol, peroxisome, plasma membrane | 24.64 | 25.51 |
| PGSC0003DMT400078144 | Potato | cytosol | 24.11 | 25.23 |
| PGSC0003DMT400075256 | Potato | cytosol | 25.18 | 25.04 |
| PGSC0003DMT400064924 | Potato | cytosol | 24.11 | 24.5 |
| PGSC0003DMT400052568 | Potato | cytosol | 24.64 | 24.17 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 25.18 | 24.14 |
| PGSC0003DMT400025094 | Potato | cytosol | 23.04 | 23.89 |
| PGSC0003DMT400040191 | Potato | cytosol | 22.86 | 23.88 |
| PGSC0003DMT400051426 | Potato | plasma membrane | 21.61 | 23.14 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 25.0 | 22.95 |
| PGSC0003DMT400071072 | Potato | cytosol | 11.43 | 17.3 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | UniProt:M1AVQ4 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| EnsemblPlantsGene:PGSC0003DMG400012067 | PGSC:PGSC0003DMG400012067 | EnsemblPlants:PGSC0003DMT400031466 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 |
| PANTHER:PTHR24177:SF117 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI000295DD28 | SEG:seg |
Description
Ankyrin repeat-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012067]
Coordinates
chr8:-:39437385..39443946
Molecular Weight (calculated)
62633.2 Da
IEP (calculated)
9.319
GRAVY (calculated)
-0.150
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRRLNEAVL RGDVEAIQKL IEEDSNIVKQ SIEGSLQQTI LHLAARLGHV ELVREIVKLF PEMVSAENRD QETPLHEACR EGRVEIVRIL VENDPSIAYK
101: TNLWDKSVLY VACERGRIEV VKYLLHNNNM HMLLMLEVDM STTSLHAAAS SGHTDITREL LKLDMDLTGL QDNEGRTPLH WAVIKGRVNI IAEILSVSLE
201: SSEMTTKHGE TILHLAVKNN HFEVLKFLME TLDVSNLMNY QDTDGNTILH LATVRKLTTM IIYLLKLGVE VNALNQKGYT SLDVVEADAS NSGALAIIPA
301: LQEAGAKRCD QLPPKFSRHP TGFHSPSSSS QHSYYSNHHH QRKHNYSGTR TKKIKLQSEG LRNARKTITI VAVLIATVTF AAGVNPPGGF NEENGKALLG
401: KKTAFKVFLV CNIVALFLSL GIVNVLVSVI PFKRRTMMKL MVATHKVMWI STLFMASAYI AAIWSILPQG KGDHWVLSEV VIIGGGCTMA VFLSLGILLV
501: RQWKRKSEWR KKRENHKKMK EGSPKSNTST VQEMKVVKKE SHEGSTNSDV DSSDHGYHLF
101: TNLWDKSVLY VACERGRIEV VKYLLHNNNM HMLLMLEVDM STTSLHAAAS SGHTDITREL LKLDMDLTGL QDNEGRTPLH WAVIKGRVNI IAEILSVSLE
201: SSEMTTKHGE TILHLAVKNN HFEVLKFLME TLDVSNLMNY QDTDGNTILH LATVRKLTTM IIYLLKLGVE VNALNQKGYT SLDVVEADAS NSGALAIIPA
301: LQEAGAKRCD QLPPKFSRHP TGFHSPSSSS QHSYYSNHHH QRKHNYSGTR TKKIKLQSEG LRNARKTITI VAVLIATVTF AAGVNPPGGF NEENGKALLG
401: KKTAFKVFLV CNIVALFLSL GIVNVLVSVI PFKRRTMMKL MVATHKVMWI STLFMASAYI AAIWSILPQG KGDHWVLSEV VIIGGGCTMA VFLSLGILLV
501: RQWKRKSEWR KKRENHKKMK EGSPKSNTST VQEMKVVKKE SHEGSTNSDV DSSDHGYHLF
001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
Arabidopsis Description
Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.