Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011032 | Potato | cytosol, peroxisome, plasma membrane | 83.14 | 93.27 |
| PGSC0003DMT400031466 | Potato | cytosol, peroxisome, plasma membrane | 83.95 | 92.5 |
| Solyc08g066770.2.1 | Tomato | cytosol | 89.14 | 90.61 |
| VIT_04s0008g03530.t01 | Wine grape | cytosol | 59.97 | 63.68 |
| VIT_04s0008g03840.t01 | Wine grape | cytosol | 55.11 | 57.14 |
| PGSC0003DMT400061439 | Potato | cytosol, peroxisome, plasma membrane | 24.96 | 28.47 |
| PGSC0003DMT400078144 | Potato | cytosol | 23.5 | 27.1 |
| PGSC0003DMT400075256 | Potato | cytosol | 24.47 | 26.82 |
| PGSC0003DMT400064924 | Potato | cytosol | 23.66 | 26.5 |
| PGSC0003DMT400040191 | Potato | cytosol | 22.85 | 26.31 |
| PGSC0003DMT400052568 | Potato | cytosol | 24.31 | 26.27 |
| PGSC0003DMT400025094 | Potato | cytosol | 22.53 | 25.74 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 24.31 | 25.68 |
| PGSC0003DMT400051426 | Potato | plasma membrane | 21.39 | 25.24 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 24.31 | 24.59 |
| PGSC0003DMT400071072 | Potato | cytosol | 11.51 | 19.19 |
Protein Annotations
| Gene3D:1.25.40.20 | EntrezGene:102598560 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | UniProt:M0ZYX8 | PFAM:PF12796 | PFAM:PF13962 |
| InterPro:PGG_dom | EnsemblPlantsGene:PGSC0003DMG400004315 | PGSC:PGSC0003DMG400004315 | EnsemblPlants:PGSC0003DMT400011023 | PFscan:PS50088 | PFscan:PS50297 |
| PANTHER:PTHR24177 | PANTHER:PTHR24177:SF117 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI000294B13B |
| RefSeq:XP_006359772.1 | SEG:seg | : | : | : | : |
Description
Ankyrin repeat-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004315]
Coordinates
chr8:+:39277337..39280330
Molecular Weight (calculated)
69273.1 Da
IEP (calculated)
8.949
GRAVY (calculated)
-0.187
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRRVNEAVL RGDVEAIQKL IEEDSNIVKQ SIEGSLNTIL HLAARLGHVE LVTEIVKLFP EMVSAENRDQ ETPLHEACRE GRVEIVRILL ENDPWIAYKT
101: NLWDKSVLYV ACERGRIEVV KYLLHNNNNN IHMLLMLEVD MSTTSLHAAA SSGHTEVVKE LAKVRPDFAW KKDELMNGCS PLHIACSKGH LDITRELLKL
201: DMDLSGLQDN EGRTPLHWAV IKGRVNIIAE ILSVSLESSE MTTKHGETIL HLAVKNNHFE VLKFLMESLD VSNLMNFQDT DGNTILHLAT VRKLNTMIIY
301: LLKLGVEVNA LNQKGYTTLD VVEADASKSG ALAIIPALLE SGAKRCDQLP PNFQDIQQVV ASPILESSWQ RKTTSFHSPS SSSQHSYHNN NYYHQRKHNN
401: NNYRGTRTKK IKLQSEGLRN ARKTITIVAV LIATVTFAAG MNPPGGFNQG NGKALLGKKP AFKVFLVCNI VALFLSLGIV NVLVSVIPFK RRTMMKLMVA
501: THKVMWISTL FMASAYIAAI WSILPQGKGD YWVLSEVVII GGGCTMAVFL SLGILLVRQC KRKSDWRKKR EEHHKKMKES PKSNTSRVEE MKVVKRESHE
601: DGSNSDVDSS DQGYHLY
101: NLWDKSVLYV ACERGRIEVV KYLLHNNNNN IHMLLMLEVD MSTTSLHAAA SSGHTEVVKE LAKVRPDFAW KKDELMNGCS PLHIACSKGH LDITRELLKL
201: DMDLSGLQDN EGRTPLHWAV IKGRVNIIAE ILSVSLESSE MTTKHGETIL HLAVKNNHFE VLKFLMESLD VSNLMNFQDT DGNTILHLAT VRKLNTMIIY
301: LLKLGVEVNA LNQKGYTTLD VVEADASKSG ALAIIPALLE SGAKRCDQLP PNFQDIQQVV ASPILESSWQ RKTTSFHSPS SSSQHSYHNN NYYHQRKHNN
401: NNYRGTRTKK IKLQSEGLRN ARKTITIVAV LIATVTFAAG MNPPGGFNQG NGKALLGKKP AFKVFLVCNI VALFLSLGIV NVLVSVIPFK RRTMMKLMVA
501: THKVMWISTL FMASAYIAAI WSILPQGKGD YWVLSEVVII GGGCTMAVFL SLGILLVRQC KRKSDWRKKR EEHHKKMKES PKSNTSRVEE MKVVKRESHE
601: DGSNSDVDSS DQGYHLY
001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
Arabidopsis Description
Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.