Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031466 | Potato | cytosol, peroxisome, plasma membrane | 84.73 | 83.21 |
| PGSC0003DMT400011023 | Potato | cytosol | 93.27 | 83.14 |
| Solyc08g066770.2.1 | Tomato | cytosol | 90.73 | 82.21 |
| VIT_04s0008g03530.t01 | Wine grape | cytosol | 60.73 | 57.49 |
| VIT_04s0008g03840.t01 | Wine grape | cytosol | 55.82 | 51.6 |
| PGSC0003DMT400061439 | Potato | cytosol, peroxisome, plasma membrane | 24.91 | 25.32 |
| PGSC0003DMT400078144 | Potato | cytosol | 24.36 | 25.05 |
| PGSC0003DMT400040191 | Potato | cytosol | 24.18 | 24.81 |
| PGSC0003DMT400075256 | Potato | cytosol | 24.91 | 24.33 |
| PGSC0003DMT400064924 | Potato | cytosol | 24.36 | 24.32 |
| PGSC0003DMT400052568 | Potato | cytosol | 25.09 | 24.17 |
| PGSC0003DMT400025094 | Potato | cytosol | 22.73 | 23.15 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 24.36 | 22.95 |
| PGSC0003DMT400051426 | Potato | plasma membrane | 21.82 | 22.94 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 24.73 | 22.3 |
| PGSC0003DMT400071072 | Potato | cytosol | 12.91 | 19.19 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | UniProt:M0ZYY3 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| EnsemblPlantsGene:PGSC0003DMG400004319 | PGSC:PGSC0003DMG400004319 | EnsemblPlants:PGSC0003DMT400011032 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 |
| PANTHER:PTHR24177:SF117 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI00029532A3 | SEG:seg |
Description
Ankyrin repeat-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004319]
Coordinates
chr8:-:39280501..39286656
Molecular Weight (calculated)
61194.0 Da
IEP (calculated)
8.669
GRAVY (calculated)
0.069
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRVNEAVF RGDVEAIQKL IEEDSNIVRQ TIEGSLQHTI LHLAARLGHV ELVREIVKLF PEMVSAENRD QETPLHEACR EGRVEIVRIL VENDPSIAYK
101: TNLWDKSVLY VACERGRIEV VKHFLLNNNM HMLLMLEVDM STTSLHVAAS SGHTEVVKEL VKVRPDFAWK KDELMNGCSP LHIACSKGHL DITRELLKLD
201: MDLSGLQDNE GRTPLHWAVI KGRVNIIAEI LSVSLESAEM ITKHGETILH LAVKNNHFEV LRFLMETLDV SNLMNFQDTD GNTILHLATV RKLTIMIIYI
301: LKLGVEVNAL NQKGHTALNV VEADASNSGV LAIIPALLEA GAKRCDQLPP NFQDIQQVDA SPILGSSWQR KTTGFHSPSS SSQHSYYNNH HHQRKHNFRG
401: TRTKKIKLQS EGLRNARKTI TIVAVLIATV TFAAGVNPPG GFNQGNGKAL LGKKPAFKVF LVCNIVALFL SLGIVNVLVS VIPFKRRTMM KLMVATHKVM
501: WISTLFMASA YIAAIWSILP QGKGDHWVLS EVVIIGGGCT MAVFLSLGIL
101: TNLWDKSVLY VACERGRIEV VKHFLLNNNM HMLLMLEVDM STTSLHVAAS SGHTEVVKEL VKVRPDFAWK KDELMNGCSP LHIACSKGHL DITRELLKLD
201: MDLSGLQDNE GRTPLHWAVI KGRVNIIAEI LSVSLESAEM ITKHGETILH LAVKNNHFEV LRFLMETLDV SNLMNFQDTD GNTILHLATV RKLTIMIIYI
301: LKLGVEVNAL NQKGHTALNV VEADASNSGV LAIIPALLEA GAKRCDQLPP NFQDIQQVDA SPILGSSWQR KTTGFHSPSS SSQHSYYNNH HHQRKHNFRG
401: TRTKKIKLQS EGLRNARKTI TIVAVLIATV TFAAGVNPPG GFNQGNGKAL LGKKPAFKVF LVCNIVALFL SLGIVNVLVS VIPFKRRTMM KLMVATHKVM
501: WISTLFMASA YIAAIWSILP QGKGDHWVLS EVVIIGGGCT MAVFLSLGIL
001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY
Arabidopsis Description
Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.