Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21558 | Soybean | mitochondrion | 26.75 | 55.26 |
| HORVU5Hr1G032310.3 | Barley | cytosol | 48.41 | 48.72 |
| HORVU0Hr1G034830.1 | Barley | cytosol | 42.04 | 43.42 |
| AGP50799 | Barley | cytosol, plastid | 42.04 | 42.31 |
| HORVU0Hr1G031420.1 | Barley | cytosol | 42.04 | 42.31 |
| HORVU0Hr1G034730.2 | Barley | cytosol | 42.04 | 42.31 |
| HORVU0Hr1G034770.2 | Barley | cytosol | 42.04 | 42.31 |
| HORVU2Hr1G121660.2 | Barley | cytosol | 42.04 | 42.31 |
| HORVU6Hr1G049520.2 | Barley | cytosol | 42.04 | 42.31 |
| HORVU7Hr1G107890.2 | Barley | cytosol | 42.04 | 42.31 |
| HORVU2Hr1G121420.2 | Barley | cytosol | 41.4 | 41.67 |
| HORVU5Hr1G004530.2 | Barley | cytosol | 41.4 | 41.67 |
| HORVU5Hr1G064870.2 | Barley | cytosol | 41.4 | 41.67 |
| HORVU4Hr1G048750.1 | Barley | cytosol | 0.64 | 2.5 |
| HORVU6Hr1G046780.2 | Barley | cytosol, endoplasmic reticulum, mitochondrion | 0.64 | 2.5 |
Protein Annotations
| Gene3D:1.10.455.10 | MapMan:17.7.2.2.7 | UniProt:A0A287NDX9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G016750 | EnsemblPlants:HORVU4Hr1G016750.1 | InterPro:IPR036823 |
| PFAM:PF00177 | PIRSF:PIRSF002122 | ScanProsite:PS00052 | PANTHER:PTHR11205 | PANTHER:PTHR11205:SF19 | InterPro:Ribosomal_S5/S7 |
| InterPro:Ribosomal_S7_CS | InterPro:Ribosomal_S7_dom | InterPro:Ribosomal_S7_dom_sf | SUPFAM:SSF47973 | UniParc:UPI000B4651FA | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:+:70764315..70764787
Molecular Weight (calculated)
14144.6 Da
IEP (calculated)
11.643
GRAVY (calculated)
-0.296
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRAMKKI QQKTETNPLS VLRQAIRGVT PDIAVKAXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XLRCHPWRRH DPSMIPLSNQ KADILSLAKR FFSPNTSNTV FLVLMTI
101: XXXXXXXXXX XLRCHPWRRH DPSMIPLSNQ KADILSLAKR FFSPNTSNTV FLVLMTI
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
Arabidopsis Description
RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P61841]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.