Factsheet for HORVU0Hr1G034830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041145.1-P	Field mustard	cytosol	98.68	96.15
AGP50799	Barley	cytosol, plastid	98.68	96.15
HORVU0Hr1G031420.1	Barley	cytosol	98.68	96.15
HORVU0Hr1G034730.2	Barley	cytosol	98.68	96.15
HORVU0Hr1G034770.2	Barley	cytosol	98.68	96.15
HORVU2Hr1G121660.2	Barley	cytosol	98.68	96.15
HORVU7Hr1G107890.2	Barley	cytosol	98.68	96.15
HORVU6Hr1G049520.2	Barley	cytosol	98.68	96.15
HORVU2Hr1G121420.2	Barley	cytosol	98.03	95.51
HORVU5Hr1G004530.2	Barley	cytosol	97.37	94.87
HORVU5Hr1G064870.2	Barley	cytosol	97.37	94.87
EES09873	Sorghum	cytosol	96.71	94.23
TraesCS1D01G179100.1	Wheat	cytosol	96.71	94.23
TraesCS1B01G406600.1	Wheat	cytosol	94.74	92.9
TraesCSU01G149800.1	Wheat	cytosol	93.42	92.21
Os09t0110750-00	Rice	cytosol	26.32	90.91
HORVU4Hr1G048750.1	Barley	cytosol	21.71	82.5
HORVU5Hr1G032310.3	Barley	cytosol	82.89	80.77
PGSC0003DMT400088629	Potato	mitochondrion	69.08	80.15
HORVU6Hr1G046780.2	Barley	cytosol, endoplasmic reticulum, mitochondrion	21.05	80.0
PGSC0003DMT400030854	Potato	mitochondrion	76.32	80.0
CDY44968	Canola	cytosol	19.74	75.0
Solyc09g061450.1.1	Tomato	plastid	37.5	43.51
HORVU4Hr1G016750.1	Barley	cytosol	43.42	42.04

Protein Annotations

Gene3D:1.10.455.10	MapMan:17.7.2.2.7	UniProt:A0A287EBD3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	EnsemblPlantsGene:HORVU0Hr1G034830	EnsemblPlants:HORVU0Hr1G034830.1
InterPro:IPR036823	HAMAP:MF_00480_B	PFAM:PF00177	PIRSF:PIRSF002122	ScanProsite:PS00052	PANTHER:PTHR11205
PANTHER:PTHR11205:SF19	InterPro:Ribosomal_S5/S7	InterPro:Ribosomal_S7_CS	InterPro:Ribosomal_S7_bac/org-type	InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf
SUPFAM:SSF47973	TIGRFAMs:TIGR01029	UniParc:UPI000B4649B6	:	:	:

Description

Ribosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:A0A287EBD3]

Coordinates

chrchrUn:+:206052247..206052720

Molecular Weight (calculated)

17152.2 Da

IEP (calculated)

12.286

GRAVY (calculated)

-0.727

Length

152 amino acids

Sequence
(BLAST)

001: MSRRGTAEKR TAKSDPIFRN RLVNMVVNRI MKDGKKSLAY QILYRAVKKI QQKTETNPLL VLRQAIRRVT PNIGVKTRRN KKGSTRKVPI EIGSKQGRAL
101: AIRWLLEASQ KRPGRNMAFK LSSELVDAAK GSGGAIRKKE ATHRMAEANR ST

Best Arabidopsis Sequence Match ( ATCG00900.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P61841]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.