Factsheet for TraesCS1B01G406600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041145.1-P	Field mustard	cytosol	96.77	96.15
CAA33919	Rice	cytosol	96.13	95.51
CAA33942	Rice	cytosol, plasma membrane	96.13	95.51
EES09873	Sorghum	cytosol	95.48	94.87
HORVU5Hr1G064870.2	Barley	cytosol	95.48	94.87
HORVU0Hr1G034830.1	Barley	cytosol	92.9	94.74
TraesCS3B01G187900.1	Wheat	cytosol	94.84	94.23
TraesCS1D01G179100.1	Wheat	cytosol	94.84	94.23
TraesCS2B01G314400.1	Wheat	cytosol, mitochondrion	94.84	94.23
TraesCS6B01G357300.1	Wheat	mitochondrion	76.13	93.65
TraesCS3B01G013500.1	Wheat	cytosol	94.19	93.59
TraesCS4B01G146200.1	Wheat	cytosol	93.55	92.95
TraesCS4B01G238600.1	Wheat	cytosol	82.58	92.09
TraesCS2B01G252700.1	Wheat	mitochondrion	89.68	89.1
TraesCSU01G149800.1	Wheat	cytosol	87.74	88.31
CDY44968	Canola	cytosol	21.29	82.5
PGSC0003DMT400088629	Potato	mitochondrion	69.03	81.68
PGSC0003DMT400030854	Potato	mitochondrion	76.13	81.38
TraesCS3B01G231300.1	Wheat	cytosol	25.16	81.25
KRH21558	Soybean	mitochondrion	22.58	46.05
Solyc09g061450.1.1	Tomato	plastid	38.06	45.04

Protein Annotations

Gene3D:1.10.455.10	MapMan:17.7.2.2.7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015935	GO:GO:0019538	InterPro:IPR036823	HAMAP:MF_00480_B	PFAM:PF00177	PIRSF:PIRSF002122
ScanProsite:PS00052	PANTHER:PTHR11205	PANTHER:PTHR11205:SF19	InterPro:Ribosomal_S5/S7	InterPro:Ribosomal_S7_CS	InterPro:Ribosomal_S7_bac/org-type
InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	TIGRFAMs:TIGR01029	EnsemblPlantsGene:TraesCS1B01G406600	EnsemblPlants:TraesCS1B01G406600.1
TIGR:cd14871	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:633746674..633747143

Molecular Weight (calculated)

17606.8 Da

IEP (calculated)

12.206

GRAVY (calculated)

-0.749

Length

155 amino acids

Sequence
(BLAST)

001: MSRQGTAEKR TAKSDPIFRN RLVNMVVNRI MKDGKKSLAY QILYRAVKKI QQKTETNPLL VLRQAIRRVT PNIGVKTRRD KKGSTRKVSI EIGSKQGRAL
101: AIRWLLEASQ KRPGRNMAFK LSSELVDAAK GSGAKRKKEA THRMPEANRA LAHFR

Best Arabidopsis Sequence Match ( ATCG00900.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P61841]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.