CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
peroxisome 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0110750-00	Rice	cytosol	40.79	70.45
Solyc01g018060.1.1	Tomato	cytosol, mitochondrion	22.37	32.08
TraesCS4B01G238600.1	Wheat	cytosol	50.0	27.34
Solyc01g007670.2.1	Tomato	nucleus, plastid	55.26	27.1
HORVU4Hr1G016750.1	Barley	cytosol	55.26	26.75
Solyc09g050080.1.1	Tomato	cytosol	51.32	25.16
TraesCSU01G259500.1	Wheat	cytosol	48.68	23.72
TraesCSU01G149800.1	Wheat	cytosol	47.37	23.38
CAA33919	Rice	cytosol	47.37	23.08
TraesCSU01G238400.1	Wheat	cytosol, golgi	47.37	23.08
TraesCSU01G238000.1	Wheat	cytosol, mitochondrion	47.37	23.08
TraesCSU01G158100.1	Wheat	cytosol	47.37	23.08
TraesCS5D01G457500.1	Wheat	cytosol	47.37	23.08
TraesCS3B01G013500.1	Wheat	cytosol	47.37	23.08
TraesCS2B01G314400.1	Wheat	cytosol, mitochondrion	47.37	23.08
Bra041145.1-P	Field mustard	cytosol	47.37	23.08
CAA33942	Rice	cytosol, plasma membrane	47.37	23.08
GRMZM5G806488_P01	Maize	plastid	47.37	23.08
GRMZM5G844628_P01	Maize	cytosol	47.37	23.08
TraesCS4D01G155300.1	Wheat	cytosol	42.11	23.02
PGSC0003DMT400030854	Potato	mitochondrion	43.42	22.76
TraesCS4A01G024600.1	Wheat	cytosol, mitochondrion	46.05	22.73
TraesCS1B01G406600.1	Wheat	cytosol	46.05	22.58
TraesCS4B01G146200.1	Wheat	cytosol	46.05	22.44
TraesCSU01G190200.1	Wheat	cytosol	46.05	22.44
EES09873	Sorghum	cytosol	46.05	22.44
TraesCSU01G157000.1	Wheat	cytosol	46.05	22.44
TraesCS6A01G114400.1	Wheat	cytosol	46.05	22.44
TraesCS1D01G179100.1	Wheat	cytosol	46.05	22.44
TraesCS1A01G157100.1	Wheat	cytosol	46.05	22.15
TraesCS3B01G187900.1	Wheat	cytosol	44.74	21.79
TraesCS6D01G375300.1	Wheat	cytosol	44.74	21.79
TraesCS2B01G252700.1	Wheat	mitochondrion	44.74	21.79
TraesCS4A01G156100.1	Wheat	mitochondrion	40.79	20.0
PGSC0003DMT400088629	Potato	mitochondrion	28.95	16.79
Solyc11g021130.1.1	Tomato	cytosol, nucleus	46.05	12.28
TraesCS6B01G357300.1	Wheat	mitochondrion	17.11	10.32
OQU86590	Sorghum	mitochondrion	6.58	5.43
Solyc09g061450.1.1	Tomato	plastid	5.26	3.05
TraesCS3B01G231300.1	Wheat	cytosol	1.32	2.08
KRH35362	Soybean	mitochondrion	0.0	0.0
CDY44968	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.455.10	MapMan:35.1	EMBL:ACUP02008360	EnsemblPlantsGene:GLYMA_13G245200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	GO:GO:0030529
InterPro:IPR036823	UniProt:K7M1P5	EnsemblPlants:KRH21558	ProteinID:KRH21558	ProteinID:KRH21558.1	PFAM:PF00177
InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	UniParc:UPI000294C798	:	:

Description

hypothetical protein

Coordinates

chr13:-:35444517..35444785

Molecular Weight (calculated)

8934.3 Da

IEP (calculated)

11.455

GRAVY (calculated)

-0.172

Length

76 amino acids

Sequence
(BLAST)

1: MILSLIKVIK KWIPPFTLMS RRGTGEEKIA KSDQIYRNRL VNMLVNRILK HGKKSLAYQI IYRPLISDSA HFHSRL

Best Arabidopsis Sequence Match ( ATCG01240.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.