Factsheet for GRMZM5G844628_P01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041145.1-P	Field mustard	cytosol	100.0	100.0
HORVU7Hr1G107890.2	Barley	cytosol	100.0	100.0
HORVU6Hr1G049520.2	Barley	cytosol	100.0	100.0
HORVU2Hr1G121660.2	Barley	cytosol	100.0	100.0
HORVU0Hr1G034770.2	Barley	cytosol	100.0	100.0
HORVU0Hr1G034730.2	Barley	cytosol	100.0	100.0
HORVU0Hr1G031420.1	Barley	cytosol	100.0	100.0
GRMZM5G806488_P01	Maize	plastid	100.0	100.0
AGP50799	Barley	cytosol, plastid	100.0	100.0
HORVU2Hr1G121420.2	Barley	cytosol	99.36	99.36
TraesCSU01G238400.1	Wheat	cytosol, golgi	99.36	99.36
HORVU5Hr1G004530.2	Barley	cytosol	98.72	98.72
TraesCS5D01G457500.1	Wheat	cytosol	98.72	98.72
TraesCSU01G259500.1	Wheat	cytosol	98.08	98.08
TraesCSU01G238000.1	Wheat	cytosol, mitochondrion	98.08	98.08
TraesCS3B01G187900.1	Wheat	cytosol	98.08	98.08
TraesCS2B01G314400.1	Wheat	cytosol, mitochondrion	98.08	98.08
TraesCS3B01G013500.1	Wheat	cytosol	97.44	97.44
TraesCS6D01G375300.1	Wheat	cytosol	97.44	97.44
TraesCSU01G158100.1	Wheat	cytosol	97.44	97.44
TraesCS1A01G157100.1	Wheat	cytosol	98.08	96.84
TraesCS6B01G357300.1	Wheat	mitochondrion	78.21	96.83
TraesCS6A01G114400.1	Wheat	cytosol	96.79	96.79
TraesCS4A01G024600.1	Wheat	cytosol, mitochondrion	95.51	96.75
TraesCS4B01G238600.1	Wheat	cytosol	84.62	94.96
TraesCS2B01G252700.1	Wheat	mitochondrion	91.67	91.67
CDY44968	Canola	cytosol	22.44	87.5
TraesCS3B01G231300.1	Wheat	cytosol	26.28	85.42
PGSC0003DMT400088629	Potato	mitochondrion	70.51	83.97
PGSC0003DMT400030854	Potato	mitochondrion	77.56	83.45
KRH21558	Soybean	mitochondrion	23.08	47.37
Solyc09g061450.1.1	Tomato	plastid	39.1	46.56

Protein Annotations

Gene3D:1.10.455.10	MapMan:17.7.2.2.7	EntrezGene:4055928	EntrezGene:845239	EntrezGene:845240	ProteinID:AAA85360.1
ProteinID:AAR91190.1	ProteinID:CAA60339.1	ProteinID:CAA60362.1	EMBL:EU956559	EMBL:EU957350	EMBL:EU958000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	GO:GO:0030529	EnsemblPlantsGene:GRMZM5G844628
EnsemblPlants:GRMZM5G844628_P01	EnsemblPlants:GRMZM5G844628_T01	InterPro:IPR036823	HAMAP:MF_00480_B	UniProt:P12339	PFAM:PF00177
PIRSF:PIRSF002122	ScanProsite:PS00052	PANTHER:PTHR11205	PANTHER:PTHR11205:SF19	UniProt:Q6R9D1	InterPro:Ribosomal_S5/S7
InterPro:Ribosomal_S7_CS	InterPro:Ribosomal_S7_bac/org-type	InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	TIGRFAMs:TIGR01029
UniParc:UPI00001349D6	:	:	:	:	:

Description

rps7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P12339]

Coordinates

chrPt:-:91653..93101

Molecular Weight (calculated)

17659.9 Da

IEP (calculated)

12.335

GRAVY (calculated)

-0.683

Length

156 amino acids

Sequence
(BLAST)

001: MSRRGTAEKR TAKSDPIFRN RLVNMVVNRI MKDGKKSLAY QILYRAVKKI QQKTETNPLL VLRQAIRRVT PNIGVKTRRN KKGSTRKVPI EIGSKQGRAL
101: AIRWLLEASQ KRPGRNMAFK LSSELVDAAK GSGGAIRKKE ATHRMAEANR ALAHFR

Best Arabidopsis Sequence Match ( ATCG01240.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.