Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G238000.1 | Wheat | cytosol, mitochondrion | 100.0 | 100.0 |
| GRMZM5G806488_P01 | Maize | plastid | 98.08 | 98.08 |
| GRMZM5G844628_P01 | Maize | cytosol | 98.08 | 98.08 |
| Bra041145.1-P | Field mustard | cytosol | 98.08 | 98.08 |
| TraesCS3B01G187900.1 | Wheat | cytosol | 97.44 | 97.44 |
| HORVU5Hr1G004530.2 | Barley | cytosol | 96.79 | 96.79 |
| TraesCS3B01G013500.1 | Wheat | cytosol | 96.79 | 96.79 |
| TraesCS4A01G024600.1 | Wheat | cytosol, mitochondrion | 95.51 | 96.75 |
| TraesCS6A01G114400.1 | Wheat | cytosol | 96.15 | 96.15 |
| TraesCS4B01G146200.1 | Wheat | cytosol | 95.51 | 95.51 |
| TraesCS1B01G406600.1 | Wheat | cytosol | 94.23 | 94.84 |
| TraesCS6B01G357300.1 | Wheat | mitochondrion | 76.28 | 94.44 |
| TraesCS4B01G238600.1 | Wheat | cytosol | 83.97 | 94.24 |
| TraesCS2B01G252700.1 | Wheat | mitochondrion | 89.74 | 89.74 |
| CDY44968 | Canola | cytosol | 22.44 | 87.5 |
| TraesCS3B01G231300.1 | Wheat | cytosol | 26.28 | 85.42 |
| PGSC0003DMT400088629 | Potato | mitochondrion | 69.87 | 83.21 |
| PGSC0003DMT400030854 | Potato | mitochondrion | 76.92 | 82.76 |
| KRH21558 | Soybean | mitochondrion | 23.08 | 47.37 |
| Solyc09g061450.1.1 | Tomato | plastid | 38.46 | 45.8 |
Protein Annotations
| Gene3D:1.10.455.10 | MapMan:17.7.2.2.7 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 |
| InterPro:IPR036823 | HAMAP:MF_00480_B | PFAM:PF00177 | PIRSF:PIRSF002122 | PANTHER:PTHR11205 | PANTHER:PTHR11205:SF19 |
| InterPro:Ribosomal_S5/S7 | InterPro:Ribosomal_S7_bac/org-type | InterPro:Ribosomal_S7_dom | InterPro:Ribosomal_S7_dom_sf | SUPFAM:SSF47973 | TIGRFAMs:TIGR01029 |
| EnsemblPlantsGene:TraesCS2B01G314400 | EnsemblPlants:TraesCS2B01G314400.1 | TIGR:cd14871 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:449213039..449213509
Molecular Weight (calculated)
17599.7 Da
IEP (calculated)
12.283
GRAVY (calculated)
-0.662
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRGTAEKR TAKSDPIFRN RLVNMVVNRI LKDGKNSLAY QILYRAVKKI QQKTETNPLL VLRQAIRRVT PNIGVKTRRN KKGSTRKVPI EIGSKQGRAL
101: AIRWLLEASQ KRPGQNMAFK LSSELVDAAK GSGGAIRKKE ATHRMAEANR ALAHFR
101: AIRWLLEASQ KRPGQNMAFK LSSELVDAAK GSGGAIRKKE ATHRMAEANR ALAHFR
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
Arabidopsis Description
RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.