Factsheet for TraesCS2B01G252700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041145.1-P	Field mustard	cytosol	91.67	91.67
GRMZM5G806488_P01	Maize	plastid	91.67	91.67
GRMZM5G844628_P01	Maize	cytosol	91.67	91.67
TraesCS1A01G157100.1	Wheat	cytosol	92.31	91.14
TraesCS3B01G187900.1	Wheat	cytosol	90.38	90.38
TraesCS3B01G013500.1	Wheat	cytosol	90.38	90.38
TraesCS2B01G314400.1	Wheat	cytosol, mitochondrion	89.74	89.74
TraesCS1B01G406600.1	Wheat	cytosol	89.1	89.68
TraesCS6B01G357300.1	Wheat	mitochondrion	71.79	88.89
TraesCS4B01G146200.1	Wheat	cytosol	88.46	88.46
TraesCS4B01G238600.1	Wheat	cytosol	78.21	87.77
TraesCS3B01G231300.1	Wheat	cytosol	25.64	83.33
CDY44968	Canola	cytosol	20.51	80.0
PGSC0003DMT400088629	Potato	mitochondrion	63.46	75.57
PGSC0003DMT400030854	Potato	mitochondrion	69.87	75.17
KRH21558	Soybean	mitochondrion	21.79	44.74
Solyc09g061450.1.1	Tomato	plastid	35.26	41.98

Protein Annotations

Gene3D:1.10.455.10	MapMan:17.7.2.2.7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015935	GO:GO:0019538	InterPro:IPR036823	HAMAP:MF_00480_B	PFAM:PF00177	PIRSF:PIRSF002122
ScanProsite:PS00052	PANTHER:PTHR11205	PANTHER:PTHR11205:SF19	InterPro:Ribosomal_S5/S7	InterPro:Ribosomal_S7_CS	InterPro:Ribosomal_S7_bac/org-type
InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	TIGRFAMs:TIGR01029	EnsemblPlantsGene:TraesCS2B01G252700	EnsemblPlants:TraesCS2B01G252700.1
TIGR:cd14871	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:272615552..272616022

Molecular Weight (calculated)

17574.7 Da

IEP (calculated)

12.104

GRAVY (calculated)

-0.662

Length

156 amino acids

Sequence
(BLAST)

001: MSRRGTTEKR TAKSDPIFLN RLVNMVVNHI MKDGKKSLAY QILYRAMKKI QQKTETNPLL VLHHAIRRVT PNIGVKTRSN KKGSTRKVST EIGSKQGRAL
101: AIRWLLEASQ TRPGRNMAFK LSSKLVDAAK GSGGAIRKKE ATHRMADENR ALAHFR

Best Arabidopsis Sequence Match ( AT2G37270.1 )
(BLAST)

001: MAASAEIDAE IQQQLTNEVK LFNRWSFDDV SVTDISLVDY IGVQPSKHAT FVPHTAGRYS VKRFRKAQCP IVERLTNSLM MHGRNNGKKL MAVRIVKHAM
101: EIIHLLSDLN PIQVIIDAIV NSGPREDATR IGSAGVVRRQ AVDISPLRRV NQAIFLLTTG AREAAFRNIK TIAECLADEL INAAKGSSNS YAIKKKDEIE
201: RVAKANR

Arabidopsis Description

RPS5A40S ribosomal protein S5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.