Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041145.1-P | Field mustard | cytosol | 96.84 | 98.08 |
| GRMZM5G806488_P01 | Maize | plastid | 96.84 | 98.08 |
| GRMZM5G844628_P01 | Maize | cytosol | 96.84 | 98.08 |
| TraesCS6A01G114400.1 | Wheat | cytosol | 93.67 | 94.87 |
| TraesCS4A01G024600.1 | Wheat | cytosol, mitochondrion | 92.41 | 94.81 |
| TraesCS2B01G252700.1 | Wheat | mitochondrion | 91.14 | 92.31 |
| TraesCS4A01G156100.1 | Wheat | mitochondrion | 86.71 | 88.39 |
| CDY44968 | Canola | cytosol | 22.15 | 87.5 |
| TraesCS3B01G231300.1 | Wheat | cytosol | 25.95 | 85.42 |
| PGSC0003DMT400088629 | Potato | mitochondrion | 67.72 | 81.68 |
| PGSC0003DMT400030854 | Potato | mitochondrion | 74.68 | 81.38 |
| Solyc09g061450.1.1 | Tomato | plastid | 38.61 | 46.56 |
| KRH21558 | Soybean | mitochondrion | 22.15 | 46.05 |
Protein Annotations
| Gene3D:1.10.455.10 | MapMan:17.7.2.2.7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015935 | GO:GO:0019538 | InterPro:IPR036823 | HAMAP:MF_00480_B | PFAM:PF00177 | PIRSF:PIRSF002122 |
| ScanProsite:PS00052 | PANTHER:PTHR11205 | PANTHER:PTHR11205:SF19 | InterPro:Ribosomal_S5/S7 | InterPro:Ribosomal_S7_CS | InterPro:Ribosomal_S7_bac/org-type |
| InterPro:Ribosomal_S7_dom | InterPro:Ribosomal_S7_dom_sf | SUPFAM:SSF47973 | TIGRFAMs:TIGR01029 | EnsemblPlantsGene:TraesCS1A01G157100 | EnsemblPlants:TraesCS1A01G157100.1 |
| TIGR:cd14871 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:278527011..278527487
Molecular Weight (calculated)
17862.2 Da
IEP (calculated)
12.232
GRAVY (calculated)
-0.620
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMSRRGTAE KRTAKSDPIF RNRLVNMVVN HIMKDGKKSL AYQILYRAMK KIQQKTETNP LLVLRQAIRR VTPNIGVKTT RNKKGSTRKV PIEIGSKQGR
101: ALAIRWLLEA SQKRPGRNMA FKLSSELVDA AKGSGGAIRK KEATHRMAEA NRALAHFR
101: ALAIRWLLEA SQKRPGRNMA FKLSSELVDA AKGSGGAIRK KEATHRMAEA NRALAHFR
001: MAASAEIDAE IQQQLTNEVK LFNRWSFDDV SVTDISLVDY IGVQPSKHAT FVPHTAGRYS VKRFRKAQCP IVERLTNSLM MHGRNNGKKL MAVRIVKHAM
101: EIIHLLSDLN PIQVIIDAIV NSGPREDATR IGSAGVVRRQ AVDISPLRRV NQAIFLLTTG AREAAFRNIK TIAECLADEL INAAKGSSNS YAIKKKDEIE
201: RVAKANR
101: EIIHLLSDLN PIQVIIDAIV NSGPREDATR IGSAGVVRRQ AVDISPLRRV NQAIFLLTTG AREAAFRNIK TIAECLADEL INAAKGSSNS YAIKKKDEIE
201: RVAKANR
Arabidopsis Description
RPS5A40S ribosomal protein S5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.