CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CAA33942	Rice	cytosol, plasma membrane	100.0	100.0
Bra041145.1-P	Field mustard	cytosol	99.36	99.36
EES09873	Sorghum	cytosol	97.44	97.44
TraesCS1D01G179100.1	Wheat	cytosol	96.79	96.79
TraesCS1B01G406600.1	Wheat	cytosol	95.51	96.13
Os09t0110750-00	Rice	cytosol	25.64	90.91
CDY44968	Canola	cytosol	21.79	85.0
PGSC0003DMT400088629	Potato	mitochondrion	69.87	83.21
PGSC0003DMT400030854	Potato	mitochondrion	76.92	82.76
KRH21558	Soybean	mitochondrion	23.08	47.37
Solyc09g061450.1.1	Tomato	plastid	38.46	45.8

Protein Annotations

Gene3D:1.10.455.10	EntrezGene:107278968	EntrezGene:107280672	EntrezGene:107281766	EntrezGene:107282054	MapMan:17.7.2.2.7
EntrezGene:3131444	EntrezGene:3131445	ProteinID:AAS46151.1	ProteinID:AAS46164.1	ProteinID:AJC99359.1	ProteinID:AJC99375.1
ProteinID:AJC99446.1	ProteinID:AJC99462.1	ProteinID:BAC84682.1	ProteinID:BAD05511.1	ProteinID:CAA29827.1	EnsemblPlants:CAA33919
EnsemblPlantsGene:CAA33919	ProteinID:CAA33919	ProteinID:CAA33919.1	ProteinID:CAA33942.1	GO:GO:0000028	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015935	GO:GO:0016043	GO:GO:0019538	GO:GO:0019843	InterPro:IPR036823	HAMAP:MF_00480_B
RefSeq:NP_039433.1	RefSeq:NP_039458.1	UniProt:P0C491	PFAM:PF00177	PIRSF:PIRSF002122	ScanProsite:PS00052
PANTHER:PTHR11205	PANTHER:PTHR11205:SF19	UniProt:Q6YTM6	Reactome:R-HSA-156827	Reactome:R-HSA-156902	Reactome:R-HSA-1799339
Reactome:R-HSA-192823	Reactome:R-HSA-2408557	Reactome:R-HSA-6791226	Reactome:R-HSA-72649	Reactome:R-HSA-72689	Reactome:R-HSA-72695
Reactome:R-HSA-72702	Reactome:R-HSA-72706	Reactome:R-HSA-72764	Reactome:R-HSA-975956	Reactome:R-HSA-975957	InterPro:Ribosomal_S5/S7
InterPro:Ribosomal_S7_CS	InterPro:Ribosomal_S7_bac/org-type	InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	TIGRFAMs:TIGR01029
UniParc:UPI00001349DC	RefSeq:XP_015612724.1	RefSeq:XP_015635025.1	RefSeq:XP_015646874.1	RefSeq:XP_015649752.1	SEG:seg

Description

rps7ribosomal protein S7

Coordinates

chrPt:+:126704..127174

Molecular Weight (calculated)

17629.9 Da

IEP (calculated)

12.335

GRAVY (calculated)

-0.680

Length

156 amino acids

Sequence
(BLAST)

001: MSRRGTAEKR TAKSDPIFRN RLVNMVVNRI MKDGKKSLAY QILYRAVKKI QQKTETNPLL VLRQAIRRVT PNIGVKTRRN KKGSTRKVPI EIGSKQGRAL
101: AIRWLLEASQ KRPGRNMAFK LSSELVDAAK GGGGAIRKKE ATHRMAEANR ALAHFR

Best Arabidopsis Sequence Match ( ATCG01240.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.