Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g007670.2.1 | Tomato | nucleus, plastid | 95.48 | 95.48 |
| PGSC0003DMT400030854 | Potato | mitochondrion | 89.03 | 95.17 |
| Solyc01g018060.1.1 | Tomato | cytosol, mitochondrion | 27.1 | 79.25 |
| Solyc11g020830.1.1 | Tomato | cytosol, nucleus, plastid | 30.32 | 58.75 |
| KRH21558 | Soybean | mitochondrion | 25.16 | 51.32 |
| Solyc09g061450.1.1 | Tomato | plastid | 42.58 | 50.38 |
| Solyc11g021130.1.1 | Tomato | cytosol, nucleus | 85.81 | 46.67 |
| Solyc01g017400.1.1 | Tomato | cytosol | 57.42 | 41.01 |
Protein Annotations
| Gene3D:1.10.455.10 | MapMan:17.7.2.2.7 | GO:GO:0000028 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019843 |
| InterPro:IPR036823 | UniProt:K4CT06 | HAMAP:MF_00480_B | PFAM:PF00177 | PIRSF:PIRSF002122 | PANTHER:PTHR11205 |
| PANTHER:PTHR11205:SF19 | InterPro:Ribosomal_S5/S7 | InterPro:Ribosomal_S7_bac/org-type | InterPro:Ribosomal_S7_dom | InterPro:Ribosomal_S7_dom_sf | SUPFAM:SSF47973 |
| EnsemblPlantsGene:Solyc09g050080.1 | EnsemblPlants:Solyc09g050080.1.1 | TIGRFAMs:TIGR01029 | UniParc:UPI000276AD3A | : | : |
Description
No Description!
Coordinates
chr9:-:35456920..35457387
Molecular Weight (calculated)
17333.3 Da
IEP (calculated)
11.406
GRAVY (calculated)
-0.440
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHRGTAEKK TAKSDPIYRN LLVNMLVNRI LKHEKKSLAY QIIYRAVKKI QQKTETNPLS VLRQAIRGVT LDITVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLAASRT RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFC
101: IRWLLAASRT RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFC
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
Arabidopsis Description
RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.