Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G102800.1 | Wheat | nucleus | 33.61 | 30.83 |
| TraesCS4A01G201900.1 | Wheat | nucleus | 31.97 | 30.0 |
| HORVU4Hr1G016840.1 | Barley | nucleus | 34.43 | 29.58 |
| TraesCS4B01G106100.1 | Wheat | nucleus | 32.79 | 27.78 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G016860.1 | EnsemblPlantsGene:HORVU4Hr1G016860 | SEG:seg | UniParc:UPI000B4681AD | UniProt:A0A287NE29 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr4H:+:70951607..70952262
Molecular Weight (calculated)
13672.5 Da
IEP (calculated)
10.029
GRAVY (calculated)
-0.273
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADKPVDEG LDHICCGLHA IPRKNKARSA KKRSSKLSSR KFYKIFSRGA SFWVNIGASR TGEIQIASSL VKVYNLDSIA DSLYTVNFVP SMYRLRARAR
101: EQADITEMRC SLCSTCQETF IS
101: EQADITEMRC SLCSTCQETF IS
001: MCCFVCFYRF VFAPLWLFHA VIARGRFSLP APSMPHDRHW APFHSVMATP LLVAFEILLC VHLEDKYVVD LKIVFLPLLA FEVAILIDNV RMCRTLMPGD
101: EETMSDEAIW ETLPHFWVSI SMVFFIAATT FTLLKLCGDV AALGWWDLFI NFGIAECFAF LVCTKWSNQS IHRYSHIPEP SSSSMVVRYL DWNRGLVVTA
201: DDEHQQSNRI CGLQDIGGHV MKIPFVTFQI ILFMRLEGTP ASAKNIPILV LFVPLFLLQG AGVLFAMYRL VEKSVLLINS GSGSYGRYFT ATSSAREFLG
301: FFQHGARLLG WWSIDEGSRE EQARLYSGEA TGYNTFSPEV VKKMPKSDLV EEIWRLQAAL SEQTDITSYS QQEYERLQNE KILCRVCFED PINVVLLPCR
401: HHVLCSTCCE KCKKCPICRV LIEERMPVYD V
101: EETMSDEAIW ETLPHFWVSI SMVFFIAATT FTLLKLCGDV AALGWWDLFI NFGIAECFAF LVCTKWSNQS IHRYSHIPEP SSSSMVVRYL DWNRGLVVTA
201: DDEHQQSNRI CGLQDIGGHV MKIPFVTFQI ILFMRLEGTP ASAKNIPILV LFVPLFLLQG AGVLFAMYRL VEKSVLLINS GSGSYGRYFT ATSSAREFLG
301: FFQHGARLLG WWSIDEGSRE EQARLYSGEA TGYNTFSPEV VKKMPKSDLV EEIWRLQAAL SEQTDITSYS QQEYERLQNE KILCRVCFED PINVVLLPCR
401: HHVLCSTCCE KCKKCPICRV LIEERMPVYD V
Arabidopsis Description
Transmembrane Fragile-X-F-associated protein [Source:TAIR;Acc:AT1G68820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.