Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G102800.1 | Wheat | nucleus | 85.42 | 92.48 |
| TraesCS4A01G201900.1 | Wheat | nucleus | 81.94 | 90.77 |
| HORVU4Hr1G016840.1 | Barley | nucleus | 85.42 | 86.62 |
| HORVU4Hr1G016860.1 | Barley | cytosol | 27.78 | 32.79 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G106100.1 | EnsemblPlantsGene:TraesCS4B01G106100 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr4B:-:115549689..115550123
Molecular Weight (calculated)
16232.2 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.869
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWSTSKQQG GDQEEPKQHK MVKEVKKSET PIFTYQLPFH SLSLNKVKNI EVDRLRLSFT TAKNSTLVPV DSGSDEESDE DQGCSDIDDT VNSIGGQMTV
101: DKPMDEGLDR ICSGLHAIPR KNKARSAKKR SHKLSSRKFY KIFS
101: DKPMDEGLDR ICSGLHAIPR KNKARSAKKR SHKLSSRKFY KIFS
001: MEDDEATKQR GILEEEEENF TGRREESENE FPSHHPPPPP DELFDISTTV DPSYLISLIR KLLPIDSGSD ERHNDHMNTD NVVQGVVAIS GNGVVETSNG
101: DPESMDIGDN HDESTYEVGE TVSSCPAPGM QDGSSAWEDH GCVLWDLAAS RTHAELMVQN LILEVLHANL MVSKSPRIRE ICLGIIRNLA CHEGLLKHIE
201: STAGIVNTLV GQLFLDDTQC LSEVCRILTT GLSGAGCTSW AHCLESDDIL RHILWIAENT LNPHLIEKSV GLLLGIIEGQ PEVEQLLIPP LMNLGLTSLL
301: INLLSFEMSK LTKERIPERY PVLEIILRAI EALSASDSYS KEICSSKELF QLVCDLMKLQ DKAEVATSCV TTGVLIANML SERVDFIPEV LEDFSFLEGL
401: FSTLPFASDD VEARRALWNV IARLLARVNE SEINTFLLSQ YILVLLSNAD IIEDDFLDTQ LEDSNESRNS FPSQIKSSAR TIAVSTFIFL
101: DPESMDIGDN HDESTYEVGE TVSSCPAPGM QDGSSAWEDH GCVLWDLAAS RTHAELMVQN LILEVLHANL MVSKSPRIRE ICLGIIRNLA CHEGLLKHIE
201: STAGIVNTLV GQLFLDDTQC LSEVCRILTT GLSGAGCTSW AHCLESDDIL RHILWIAENT LNPHLIEKSV GLLLGIIEGQ PEVEQLLIPP LMNLGLTSLL
301: INLLSFEMSK LTKERIPERY PVLEIILRAI EALSASDSYS KEICSSKELF QLVCDLMKLQ DKAEVATSCV TTGVLIANML SERVDFIPEV LEDFSFLEGL
401: FSTLPFASDD VEARRALWNV IARLLARVNE SEINTFLLSQ YILVLLSNAD IIEDDFLDTQ LEDSNESRNS FPSQIKSSAR TIAVSTFIFL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:C0Z225]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.