Factsheet for HORVU5Hr1G088700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G359900.1	Wheat	cytosol	88.13	91.84
TraesCS5D01G369200.1	Wheat	cytosol	87.63	91.08
TraesCS5B01G362300.1	Wheat	cytosol	87.63	90.84
Os09t0558000-01	Rice	plasma membrane	68.18	76.7
KXG36172	Sorghum	cytosol	67.93	74.1
Zm00001d021390_P001	Maize	cytosol	66.67	72.73
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	58.84	61.32
HORVU7Hr1G113110.1	Barley	cytosol	59.6	59.3
HORVU2Hr1G086370.2	Barley	cytosol	34.09	34.97
HORVU4Hr1G053970.1	Barley	mitochondrion, nucleus, plastid	34.34	31.78
HORVU7Hr1G085010.2	Barley	plastid	25.0	27.12
HORVU7Hr1G029330.7	Barley	plastid	23.99	26.84
HORVU5Hr1G104910.2	Barley	cytosol	30.05	26.62
HORVU5Hr1G020300.3	Barley	plastid	26.01	26.61
HORVU1Hr1G016640.2	Barley	cytosol	25.0	25.92
HORVU2Hr1G080320.1	Barley	mitochondrion, peroxisome	11.87	25.68
HORVU6Hr1G086560.2	Barley	mitochondrion	24.24	24.68
HORVU1Hr1G052160.1	Barley	plastid	24.49	24.31
HORVU5Hr1G055300.9	Barley	nucleus	21.97	24.17
HORVU3Hr1G047160.19	Barley	cytosol	21.46	12.94

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	Gene3D:3.60.40.10	UniProt:A0A287S6R9	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G088700	EnsemblPlants:HORVU5Hr1G088700.1	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000B4858E1	:

Description

No Description!

Coordinates

chrchr5H:-:582294665..582301638

Molecular Weight (calculated)

42712.3 Da

IEP (calculated)

4.704

GRAVY (calculated)

-0.459

Length

396 amino acids

Sequence
(BLAST)

001: MGTYLSTPKT DKQSADGEGA RVRYGLASMQ GWRTTMEDAH TAVPQLDECT SFFAVYDGHG GKAVAKFCAK HLHMQFLRNE LSSSGDLASS ARKAFLRMDE
101: MMKGQRGWRE LAELGEKGPK FAGMLESMIW SPKGGDADKI VDGWQMEEGP HSDFSGPTCG STACVAIIRN DQLVVANAGD SRCVISRKGQ AHDLSRDHKP
201: ELESEKERIQ NAGGYIVAGR VNGSLNLTRA IGDMEMKENK LLPAEKQTVS AEPEVNTVTL SEDDEFIVLA CDGIWDCMSS QQVVDFVREK LNTEESLSAV
301: CEKVLDRCLA PESGGEGCDN MTMILVVLKK PTNSAATSSP EQSVVTPTNS AATSSPEQSA VTPTKSAATS SLEQSAVTNE EMRPSEPDAP MTPLSK

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.