Factsheet for HORVU4Hr1G053970.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G120800.1	Wheat	cytosol	75.0	84.7
TraesCS4D01G185200.1	Wheat	mitochondrion	78.74	83.83
TraesCS4B01G184100.1	Wheat	mitochondrion	78.04	82.67
Os02t0606900-01	Rice	cytosol	39.02	49.12
HORVU2Hr1G086370.2	Barley	cytosol	34.81	38.6
KXG30563	Sorghum	mitochondrion	36.92	38.54
HORVU7Hr1G113110.1	Barley	cytosol	35.28	37.94
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	33.64	37.89
HORVU5Hr1G104910.2	Barley	cytosol	36.68	35.12
HORVU5Hr1G088700.1	Barley	cytosol	31.78	34.34
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	37.15	33.97
Os02t0599150-01	Rice	cytosol	39.49	32.44
Os02t0598500-00	Rice	cytosol	39.49	32.44
HORVU2Hr1G080320.1	Barley	mitochondrion, peroxisome	13.79	32.24
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	16.12	31.08
Os02t0607500-00	Rice	vacuole	40.19	29.6
HORVU7Hr1G029330.7	Barley	plastid	20.56	24.86
HORVU5Hr1G055300.9	Barley	nucleus	20.09	23.89
Os02t0599151-00	Rice	vacuole	40.19	23.4
HORVU6Hr1G086560.2	Barley	mitochondrion	21.26	23.39
HORVU7Hr1G085010.2	Barley	plastid	19.63	23.01
HORVU1Hr1G016640.2	Barley	cytosol	19.63	21.99
HORVU5Hr1G020300.3	Barley	plastid	19.86	21.96
HORVU1Hr1G052160.1	Barley	plastid	20.33	21.8
Os02t0599200-01	Rice	cytosol, peroxisome	13.79	12.8
HORVU3Hr1G047160.19	Barley	cytosol	18.69	12.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A287P371	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	EnsemblPlantsGene:HORVU4Hr1G053970	EnsemblPlants:HORVU4Hr1G053970.1	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000B481AE4	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:449217161..449223840

Molecular Weight (calculated)

46867.9 Da

IEP (calculated)

5.823

GRAVY (calculated)

-0.493

Length

428 amino acids

Sequence
(BLAST)

001: SALHNTTAPL LILRSQGRKE RKANPAMDGD ATAKCSAGEE NDRIKYAASS MRGFRYEMED ALTAVLDLDG CSSTSFFGVY DGHGGADVAL YCSRQFHIEL
101: IKEPDYRKNL HTALEHVYFR IDEKLKRSDE WKREPAHSPG NSTLKKLLKA ALCAVKDRYV PPQHEGTTAC VALIRGNQIF VANVGDSRCV LSRNGQANDL
201: SIDHKPDLQH ERERIERAGG QVTRDGNPQR DISGRIVRVD VGIHRVGGIL AISRAIGDFQ FKRNKTLSPA QQIVTCCPDI HTVDITDDAE FLIIASDGIW
301: EAKASQEAVD FVRQRLQSGE TDLSVICERL LDSCLGRRMS DNMSVILVQF KASARIRSSP GANPTATAEA RADEIKVNIE LGGQSSNTNA NEEGGQSSNP
401: NANEDDDGSV NGCVGCFSRM DLFDAGEE

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.