Factsheet for HORVU6Hr1G029160.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G137200.1	Wheat	golgi	98.68	95.66
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	98.16	94.19
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	98.16	94.19
Os02t0180000-01	Rice	cytosol, plasma membrane	81.32	85.36
EES04637	Sorghum	cytosol	79.21	83.84
GSMUA_Achr4P12780_001	Banana	cytosol	73.95	78.93
KRH61652	Soybean	cytosol	39.47	77.72
KRH52312	Soybean	cytosol	70.26	77.39
GSMUA_Achr10P...	Banana	cytosol	68.16	77.31
CDX72331	Canola	cytosol	70.53	76.14
Zm00001d015504_P004	Maize	extracellular	80.26	76.06
CDY13457	Canola	cytosol	70.26	75.85
HORVU7Hr1G113110.1	Barley	cytosol	77.63	74.12
AT4G31860.1	Thale cress	cytosol	69.47	73.95
KRH15637	Soybean	cytosol	65.26	73.16
Solyc08g006060.2.1	Tomato	cytosol	64.47	72.06
AT2G25070.2	Thale cress	nucleus	66.84	71.55
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	73.95	71.5
KRH44580	Soybean	endoplasmic reticulum	68.95	71.2
CDX76775	Canola	nucleus	66.84	71.15
Bra023979.1-P	Field mustard	cytosol	69.74	70.67
KRH47317	Soybean	cytosol	68.16	70.38
KRH05380	Soybean	golgi	65.26	69.66
Bra032043.1-P	Field mustard	nucleus	65.53	68.41
Bra007820.1-P	Field mustard	nucleus	66.84	68.28
CDY64719	Canola	nucleus	65.53	68.22
CDY64720	Canola	nucleus	65.53	68.22
CDY53471	Canola	nucleus	65.26	68.13
KRH61653	Soybean	cytosol	23.42	65.44
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	46.58	65.31
CDY34740	Canola	nucleus	66.32	63.64
VIT_09s0018g01140.t01	Wine grape	nucleus	59.21	62.85
Solyc12g042570.1.1	Tomato	nucleus	52.37	59.58
HORVU5Hr1G088700.1	Barley	cytosol	61.32	58.84
GSMUA_Achr6P03990_001	Banana	plastid	68.42	57.4
HORVU2Hr1G086370.2	Barley	cytosol	36.58	36.01
HORVU4Hr1G053970.1	Barley	mitochondrion, nucleus, plastid	37.89	33.64
HORVU5Hr1G104910.2	Barley	cytosol	32.37	27.52
HORVU2Hr1G080320.1	Barley	mitochondrion, peroxisome	13.16	27.32
HORVU7Hr1G085010.2	Barley	plastid	23.95	24.93
HORVU5Hr1G055300.9	Barley	nucleus	22.63	23.89
HORVU1Hr1G052160.1	Barley	plastid	25.0	23.81
HORVU7Hr1G029330.7	Barley	plastid	22.11	23.73
HORVU1Hr1G016640.2	Barley	cytosol	22.89	22.77
HORVU5Hr1G020300.3	Barley	plastid	23.16	22.74
HORVU6Hr1G086560.2	Barley	mitochondrion	22.89	22.36
HORVU3Hr1G047160.19	Barley	cytosol	23.42	13.55

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	EMBL:AK371366	UniProt:F2E5E2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	EnsemblPlantsGene:HORVU6Hr1G029160	EnsemblPlants:HORVU6Hr1G029160.1	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002007D21

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E5E2]

Coordinates

chrchr6H:-:117906254..117912841

Molecular Weight (calculated)

41900.7 Da

IEP (calculated)

5.768

GRAVY (calculated)

-0.364

Length

380 amino acids

Sequence
(BLAST)

001: MHWNVVNKVH SYLNCGIHST SQISFLAKMG VYLSTPKTDK LSEDGENDKL KFGLSSMQGW RASMEDAHSA LLDLDNETAF FGVFDGHGGR VVAKFCAKYL
101: HSQVLKSEAY SSGDLGTAVH KAFFRMDEMM RGQRGWRELS ALGDKMNKFS GMIEGLIWSP RGSDSKNVED DWALEEGPHS DFDGPTCGST ACVALVRNNQ
201: LVVANAGDSR CVISRAGQAY NLSRDHKPEL VAERERILKA GGFIRMGRIN GSLNLARAIG DMEFKQNKFL PPEKQIVTSN PDINVVELCN EDDFLVLACD
301: GIWDCMSSQQ LVDFIHEHIH TESTLSAVCE RVLDRCLAPS TMGGDGCDNM TMILVQFKKP VSDKKNADAG EQSAKGKEES

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.