Factsheet for Bra023979.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13457	Canola	cytosol	93.33	99.43
AT4G31860.1	Thale cress	cytosol	85.6	89.92
GSMUA_Achr10P...	Banana	cytosol	70.4	78.81
GSMUA_Achr4P12780_001	Banana	cytosol	74.67	78.65
Bra032043.1-P	Field mustard	nucleus	75.47	77.75
Bra007820.1-P	Field mustard	nucleus	77.07	77.69
Solyc08g006060.2.1	Tomato	cytosol	68.27	75.29
Os02t0180000-01	Rice	cytosol, plasma membrane	70.93	73.48
EES04637	Sorghum	cytosol	69.33	72.42
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	75.47	72.01
Os06t0651600-01	Rice	cytosol	70.13	71.47
Zm00001d036710_P001	Maize	extracellular	69.33	71.23
EER90135	Sorghum	cytosol	68.8	70.49
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.67	69.74
TraesCS6D01G137200.1	Wheat	golgi	70.67	67.6
HORVU7Hr1G113110.1	Barley	cytosol	71.47	67.34
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	70.93	67.17
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	70.67	66.92
TraesCS7A01G504800.1	Wheat	cytosol	70.93	66.83
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	48.0	66.42
Zm00001d015504_P004	Maize	extracellular	70.4	65.84
TraesCS7D01G492000.1	Wheat	nucleus	71.2	64.96
TraesCS7B01G411900.1	Wheat	cytosol	70.67	64.48
Zm00001d046828_P003	Maize	cytosol	68.8	64.18
Zm00001d046831_P002	Maize	cytosol	67.73	62.41
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	17.33	59.09
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	24.27	57.23
GSMUA_Achr6P03990_001	Banana	plastid	65.87	54.53
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.8	52.5
Bra036796.1-P	Field mustard	nucleus	23.73	28.25
Bra038901.1-P	Field mustard	nucleus	25.33	26.61
Bra005481.1-P	Field mustard	cytosol	26.4	26.33
Bra018701.1-P	Field mustard	cytosol	25.33	25.33
Bra007784.1-P	Field mustard	nucleus	25.6	24.49
Bra021870.1-P	Field mustard	endoplasmic reticulum	25.87	24.19
Bra007669.1-P	Field mustard	cytosol	23.47	23.53
Bra025933.1-P	Field mustard	cytosol	22.4	21.99
Bra014405.1-P	Field mustard	cytosol	23.47	18.84
Bra022205.1-P	Field mustard	mitochondrion	11.2	15.91
Bra000209.1-P	Field mustard	cytosol	21.87	12.52

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	EnsemblPlantsGene:Bra023979	EnsemblPlants:Bra023979.1	EnsemblPlants:Bra023979.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M4E5C5	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002540F85	:	:	:

Description

AT4G31860 (E=4e-128) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA03:-:28467762..28469563

Molecular Weight (calculated)

41337.6 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.370

Length

375 amino acids

Sequence
(BLAST)

001: MGIYLSSPKT DKLSEDGEND KLRYGLSSMQ GWRATMEDAH AAILDLDDNS SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAILGDKISK FSGMIEGFIW SPRSGDSANR PDAWAFEEGP HSDFTGPNSG STACVAVIRH KQLFVANAGD SRCVISRKGQ AYNLSRDHKP
201: DLEAERERIL KAGGFIHAGR VNGSLNLARA IGNLFFTQCN LFYMQSLSVE LSFTGDMEFK QNKFLPTEKQ IVTASPDVNT VELCDDDDFL VLACDGIWDC
301: MSSQQLVDFI HEQMNTETKL SVVCEKVLDR CLAPNTAGGE GCDNMTMILV QFKKPLQSTE PSQAEASHNE PSSSN

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.