Factsheet for Solyc08g006060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72331	Canola	cytosol	76.47	73.86
CDY13457	Canola	cytosol	75.88	73.3
GSMUA_Achr10P...	Banana	cytosol	71.47	72.54
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	57.35	71.96
GSMUA_Achr4P12780_001	Banana	cytosol	75.0	71.63
AT4G31860.1	Thale cress	cytosol	74.71	71.15
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	79.12	68.45
Bra023979.1-P	Field mustard	cytosol	75.29	68.27
EES04637	Sorghum	cytosol	71.47	67.69
Os02t0180000-01	Rice	cytosol, plasma membrane	72.06	67.68
Os06t0651600-01	Rice	cytosol	70.29	64.95
Zm00001d036710_P001	Maize	extracellular	69.41	64.66
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.06	64.47
EER90135	Sorghum	cytosol	67.65	62.84
TraesCS6D01G137200.1	Wheat	golgi	72.06	62.5
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	72.35	62.12
Solyc12g042570.1.1	Tomato	nucleus	60.59	61.68
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	71.76	61.62
HORVU7Hr1G113110.1	Barley	cytosol	71.76	61.31
TraesCS7A01G504800.1	Wheat	cytosol	71.18	60.8
Zm00001d015504_P004	Maize	extracellular	70.88	60.1
TraesCS7D01G492000.1	Wheat	nucleus	71.76	59.37
TraesCS7B01G411900.1	Wheat	cytosol	71.76	59.37
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	19.12	59.09
Zm00001d046828_P003	Maize	cytosol	67.94	57.46
Zm00001d046831_P002	Maize	cytosol	66.47	55.53
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	25.59	54.72
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	19.12	54.17
GSMUA_Achr6P03990_001	Banana	plastid	67.65	50.77
Solyc06g009390.2.1	Tomato	cytosol	25.29	24.43
Solyc01g068000.2.1	Tomato	cytosol	25.29	24.43
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	21.76	24.42
Solyc06g065610.2.1	Tomato	plastid	25.29	22.93
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	20.88	22.47
Solyc04g082600.2.1	Tomato	cytosol	25.29	22.34
Solyc07g007220.2.1	Tomato	nucleus	25.0	22.19
Solyc02g082490.2.1	Tomato	cytosol	24.71	21.88
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	24.71	20.44
Solyc01g056690.2.1	Tomato	cytosol	25.0	13.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CI95
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:Solyc08g006060.2	EnsemblPlants:Solyc08g006060.2.1	UniParc:UPI000276BC68	:	:	:

Description

No Description!

Coordinates

chr8:-:807001..823843

Molecular Weight (calculated)

37098.7 Da

IEP (calculated)

4.725

GRAVY (calculated)

-0.374

Length

340 amino acids

Sequence
(BLAST)

001: MQGWRAAMED AHAAITDLDA STSFFGVYDG HGGKVVAKFC AKYLHQQVLK HEAYQQGDIG TSVQKAFFRM DEMMRGQRGW RELAALGDRL NKFSGMIEGL
101: IWSPRNGDGN GNTDDWAFEE GPHSDFPGPT SGCTSCVAII RENRLIVANA GDSRCVISRK SQAYNLSRDH KPDLEIERER ILKAGGFIHA GRVNGSLNLA
201: RAIGDMEFKQ NKFLPAEKQI VTADPDINTV DLCDDDDFIV LACDGVWDCM SSQQLVDFIH EQLKSESKLS AVCERVLDRC LAPTAGGEGC DNMTMILVQI
301: KKPVPSGASP DDEPSASSEK LPSSDDVIAE TKLAECGSSS

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.