CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13457	Canola	cytosol	98.86	98.86
AT4G31860.1	Thale cress	cytosol	91.48	90.2
CDX76775	Canola	nucleus	82.39	81.23
GSMUA_Achr4P12780_001	Banana	cytosol	80.68	79.78
GSMUA_Achr10P...	Banana	cytosol	75.85	79.7
CDY64720	Canola	nucleus	80.97	78.08
CDY64719	Canola	nucleus	80.97	78.08
CDY53471	Canola	nucleus	80.11	77.47
Solyc08g006060.2.1	Tomato	cytosol	73.86	76.47
Os02t0180000-01	Rice	cytosol, plasma membrane	76.7	74.59
EES04637	Sorghum	cytosol	74.43	72.98
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	80.97	72.52
Os06t0651600-01	Rice	cytosol	75.0	71.74
CDY34740	Canola	nucleus	80.68	71.72
Zm00001d036710_P001	Maize	extracellular	74.15	71.51
EER90135	Sorghum	cytosol	73.86	71.04
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	76.14	70.53
TraesCS6D01G137200.1	Wheat	golgi	76.14	68.37
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	76.42	67.93
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	76.14	67.68
HORVU7Hr1G113110.1	Barley	cytosol	76.42	67.59
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	51.7	67.16
TraesCS7A01G504800.1	Wheat	cytosol	75.85	67.09
Zm00001d015504_P004	Maize	extracellular	75.57	66.33
TraesCS7D01G492000.1	Wheat	nucleus	76.14	65.21
TraesCS7B01G411900.1	Wheat	cytosol	75.57	64.72
Zm00001d046828_P003	Maize	cytosol	73.86	64.68
Zm00001d046831_P002	Maize	cytosol	72.73	62.9
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	18.47	59.09
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	26.14	57.86
GSMUA_Achr6P03990_001	Banana	plastid	71.02	55.19
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	18.18	53.33
CDY33277	Canola	nucleus	26.7	26.33
CDY17190	Canola	cytosol	27.84	26.13
CDY11515	Canola	mitochondrion	27.84	25.79
CDX78007	Canola	nucleus	26.42	25.76
CDY37699	Canola	cytosol	28.12	25.65
CDY16304	Canola	nucleus	25.85	25.63
CDX73719	Canola	nucleus	26.14	25.48
CDY20937	Canola	cytosol	26.42	24.93
CDY27953	Canola	cytosol	26.99	24.87
CDX93640	Canola	cytosol	26.42	24.8
CDX76745	Canola	nucleus	27.56	24.74
CDY53789	Canola	cytosol	26.99	24.68
CDY37787	Canola	cytosol	24.43	23.43
CDY11411	Canola	cytosol	24.72	23.26
CDX76624	Canola	cytosol	24.72	23.2
CDY26191	Canola	cytosol	23.86	23.14
CDX93981	Canola	cytosol	24.15	22.61
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.35	21.27
CDY19191	Canola	cytosol, nucleus, peroxisome	23.01	20.61
CDX95863	Canola	golgi, mitochondrion	23.58	19.81
CDX92122	Canola	mitochondrion	16.48	17.16
CDY66303	Canola	plastid	26.7	14.9
CDY35434	Canola	cytosol, plastid	23.86	12.79
CDY22485	Canola	cytosol	23.58	12.63

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:A0A078C5N1	EnsemblPlants:CDX72331	ProteinID:CDX72331
ProteinID:CDX72331.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00099821001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EB93FC	:

Description

BnaC07g43530D

Coordinates

chrLK031796:-:710805..713179

Molecular Weight (calculated)

38738.4 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.431

Length

352 amino acids

Sequence
(BLAST)

001: MGIYLSSPKT DKFSEDGEND KLRYGLSSMQ GWRATMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAILGDKINK FSGMIEGFIW SPRSGDSANR PDAWAFEEGP HSDFTGPNSG STACVAVIRH NQLFVANAGD SRCVISRKGQ AYNLSRDHKP
201: DLEAERERIL KAGGFIHAGR VNGSLNLARA IGDMEFKQNK FLPTEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMSS QQLVDFIHEQ MNTETKLSVV
301: CEKVLDRCLA PNTAGGEGCD NMTMILVQFK KPVQSTEPSQ AEASYNEPSS SN

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.