CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53789	Canola	cytosol	96.37	96.62
Bra021870.1-P	Field mustard	endoplasmic reticulum	98.96	95.26
CDY17190	Canola	cytosol	87.31	89.87
CDY27953	Canola	cytosol	88.86	89.79
AT2G33700.1	Thale cress	cytosol	87.82	89.21
GSMUA_Achr11P...	Banana	plastid	65.8	68.28
GSMUA_Achr9P23890_001	Banana	plastid	64.25	66.13
GSMUA_Achr4P25900_001	Banana	cytosol	65.28	65.97
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	65.28	65.8
CDY16304	Canola	nucleus	59.84	65.07
CDY33277	Canola	nucleus	59.84	64.71
CDX78007	Canola	nucleus	60.36	64.54
CDX73719	Canola	nucleus	59.84	63.99
TraesCS1A01G202300.1	Wheat	plastid	60.36	62.97
TraesCS1B01G216500.1	Wheat	plastid	59.84	62.43
TraesCS1D01G205700.1	Wheat	plastid	59.59	62.16
Zm00001d000391_P002	Maize	plastid	59.07	61.29
KXG39006	Sorghum	plastid	58.81	61.02
Zm00001d029772_P001	Maize	plastid	58.81	60.53
HORVU1Hr1G052160.1	Barley	plastid	59.84	57.89
GSMUA_AchrUn_...	Banana	cytosol	66.84	57.46
CDY11515	Canola	mitochondrion	45.6	46.32
CDY37787	Canola	cytosol	43.26	45.5
CDX93981	Canola	cytosol	43.78	44.95
CDX76745	Canola	nucleus	45.6	44.9
CDY11411	Canola	cytosol	43.26	44.65
CDX76624	Canola	cytosol	43.01	44.27
CDY20937	Canola	cytosol	39.38	40.75
CDX93640	Canola	cytosol	38.6	39.73
CDX95863	Canola	golgi, mitochondrion	37.31	34.37
CDX92122	Canola	mitochondrion	26.94	30.77
CDX76775	Canola	nucleus	26.42	28.57
CDX72331	Canola	cytosol	25.65	28.12
CDY13457	Canola	cytosol	25.65	28.12
CDY26191	Canola	cytosol	25.65	27.27
CDY64719	Canola	nucleus	25.65	27.12
CDY64720	Canola	nucleus	25.65	27.12
CDY53471	Canola	nucleus	25.39	26.92
CDY66303	Canola	plastid	42.75	26.15
CDY34740	Canola	nucleus	26.42	25.76
CDY19191	Canola	cytosol, nucleus, peroxisome	25.39	24.94
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.69	22.17
CDY22485	Canola	cytosol	27.46	16.13
CDY35434	Canola	cytosol, plastid	26.68	15.68

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:A0A078HK69
UniProt:A0A078HK69	EnsemblPlants:CDY37699	ProteinID:CDY37699	ProteinID:CDY37699.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00064593001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EF07FC	:	:

Description

BnaA04g19690DBnaA04g19690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK69]

Coordinates

chrLK032406:-:123741..125329

Molecular Weight (calculated)

42547.8 Da

IEP (calculated)

4.930

GRAVY (calculated)

-0.241

Length

386 amino acids

Sequence
(BLAST)

001: MIEKSSADGM DFSPLITVLE GDFNMEKASA VETDTLDDST KQMSKGKPPR HISSMQHITS TTTSRLQEVD VCSLVMKSPD EKSEFLPVYR SGSCAEQGAK
101: QFMEDEHICI DDLVDHLGAS VDFSSLGAFY GVFDGHGGTD AALFVRKNIL RYIVEDSYFP LCVKKAIKNA FLKADYEFAD DSSLDISSGT TALTAFILGR
201: RLIIANAGDC RAVLGRRGRA IELSKDHKPN CIAEKVRIEK LGGVVYDGYL NGQLSVARAI GDWHMKGPKG SACPLSPEPE LQETDLSEDD EFLIMGCDGL
301: WDVMSSQCAV TIARKELMIH NDPERCSREL VREALKRNTC DNLTVIVVCF SPDPPQRIEI RMQSRVRRSI SAEGLNLLKG VLDGYP

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.