CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93640	Canola	cytosol	96.51	96.0
AT1G48040.1	Thale cress	cytosol	87.67	85.38
CDX95863	Canola	golgi, mitochondrion	64.88	57.76
CDX92122	Canola	mitochondrion	50.67	55.92
GSMUA_AchrUn_...	Banana	cytosol	43.16	54.58
KRH02420	Soybean	cytosol	55.23	54.21
KRH50630	Soybean	cytosol	55.5	53.63
KRH36917	Soybean	cytosol	58.18	53.58
VIT_05s0020g00390.t01	Wine grape	plastid	55.76	53.33
TraesCS5B01G082500.1	Wheat	cytosol	52.81	51.44
Os05t0134200-01	Rice	cytosol	53.62	51.41
TraesCS5D01G089900.1	Wheat	cytosol	52.55	51.31
GSMUA_Achr8P22250_001	Banana	cytosol	50.67	51.22
Os01t0295700-01	Rice	cytosol	52.01	51.05
TraesCS5A01G076600.1	Wheat	cytosol	52.55	51.04
TraesCS1B01G095600.1	Wheat	cytosol	52.28	50.78
TraesCS1D01G079600.1	Wheat	cytosol	51.74	50.52
HORVU1Hr1G016640.2	Barley	cytosol	51.74	50.52
TraesCS1A01G077500.1	Wheat	cytosol	51.74	50.26
GSMUA_Achr3P08410_001	Banana	cytosol	54.96	50.25
HORVU5Hr1G020300.3	Barley	plastid	52.01	50.13
CDY11411	Canola	cytosol	49.87	49.73
GSMUA_Achr10P...	Banana	cytosol	53.08	49.5
CDY37787	Canola	cytosol	48.53	49.32
Zm00001d008171_P001	Maize	cytosol	52.28	49.24
CDX76624	Canola	cytosol	49.33	49.07
CDX93981	Canola	cytosol	49.33	48.94
EES17660	Sorghum	cytosol, peroxisome, plastid	52.55	48.88
EES02832	Sorghum	cytosol	51.47	47.88
PGSC0003DMT400069839	Potato	cytosol	50.4	47.0
Zm00001d024732_P001	Maize	cytosol	50.67	46.67
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.94	46.23
CDY16304	Canola	nucleus	39.41	41.41
CDX73719	Canola	nucleus	39.41	40.72
CDY33277	Canola	nucleus	38.87	40.62
CDY17190	Canola	cytosol	40.75	40.53
CDX78007	Canola	nucleus	39.14	40.44
CDY37699	Canola	cytosol	40.75	39.38
CDY27953	Canola	cytosol	40.21	39.27
CDY53789	Canola	cytosol	40.21	38.96
CDY11515	Canola	mitochondrion	38.34	37.63
CDX76745	Canola	nucleus	38.34	36.48
CDY66303	Canola	plastid	49.33	29.16
CDY53471	Canola	nucleus	27.08	27.75
CDX76775	Canola	nucleus	25.74	26.89
CDY64720	Canola	nucleus	26.27	26.85
CDY64719	Canola	nucleus	26.27	26.85
CDY13457	Canola	cytosol	25.2	26.7
CDX72331	Canola	cytosol	24.93	26.42
CDY26191	Canola	cytosol	25.2	25.9
CDY19191	Canola	cytosol, nucleus, peroxisome	25.2	23.92
CDY34740	Canola	nucleus	25.2	23.74
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.87	21.72
CDY22485	Canola	cytosol	24.66	14.0
CDY35434	Canola	cytosol, plastid	23.86	13.55

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078G7E7	UniProt:A0A078G7E7
EnsemblPlants:CDY20937	ProteinID:CDY20937	ProteinID:CDY20937.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00013310001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EAD4CE	SEG:seg	:	:

Description

BnaC06g01570DBnaC06g01570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7E7]

Coordinates

chrLK032114:-:580543..582805

Molecular Weight (calculated)

41253.5 Da

IEP (calculated)

4.563

GRAVY (calculated)

-0.222

Length

373 amino acids

Sequence
(BLAST)

001: MILSQPEIRV LDVKCHISSA KEQNNFRVSE SVRAEVSDSA ETPRFESGMS FATTSIEEPT IEFFPTIRSG SFADIRGRET MEDEHICIDD LSAQFRSVNF
101: SLPSAFYGVF DGHGGPEASL YMKENLTRLF FQDSVFPEMP SVADNFFLQE LENSHRKAFA LADLAMADES IVSGSCGTTA LTALIVGRHL LVANAGDCRA
201: VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKSPFTGS SSPLISDPDI QQIVLTEDDE FLILACDGIW DVLSSQNAVS
301: NVRQGLRRHG DPRQSAMELG KEAARLNSSD NLTVVVICFS SVPSPPQQPQ RRRLRFCVSD EARARLQAML GGD

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.