CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007784.1-P	Field mustard	nucleus	91.32	88.52
CDX76745	Canola	nucleus	89.21	86.48
AT2G25620.2	Thale cress	nucleus	80.26	77.81
KRH52505	Soybean	cytosol	65.53	67.3
KRH61828	Soybean	cytosol	64.74	66.49
VIT_04s0008g04780.t01	Wine grape	cytosol	63.16	63.16
PGSC0003DMT400067098	Potato	cytosol, plastid	61.84	62.67
EER88596	Sorghum	cytosol, plastid	59.21	62.5
Solyc06g065610.2.1	Tomato	plastid	60.79	61.6
Zm00001d046450_P001	Maize	cytosol, plastid	58.16	61.39
TraesCS7A01G371100.1	Wheat	plastid	57.89	61.11
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	58.16	61.05
Os06t0597200-01	Rice	cytosol	58.16	60.22
TraesCS7D01G351600.1	Wheat	cytosol, plastid	57.89	60.11
HORVU7Hr1G085010.2	Barley	plastid	57.63	60.0
GSMUA_Achr7P08470_001	Banana	cytosol	58.16	57.7
GSMUA_Achr10P...	Banana	cytosol	57.37	56.77
CDY16304	Canola	nucleus	44.21	47.32
CDY33277	Canola	nucleus	44.21	47.06
CDY17190	Canola	cytosol	45.53	46.13
CDX78007	Canola	nucleus	43.68	45.98
CDY53789	Canola	cytosol	46.58	45.97
CDX73719	Canola	nucleus	43.42	45.71
CDY37699	Canola	cytosol	46.32	45.6
CDY27953	Canola	cytosol	45.53	45.29
CDY11411	Canola	cytosol	40.79	41.44
CDX76624	Canola	cytosol	40.79	41.33
CDX93981	Canola	cytosol	40.79	41.22
CDY37787	Canola	cytosol	38.95	40.33
CDY20937	Canola	cytosol	37.63	38.34
CDX93640	Canola	cytosol	37.11	37.6
CDX95863	Canola	golgi, mitochondrion	37.37	33.89
CDX92122	Canola	mitochondrion	26.32	29.59
CDX72331	Canola	cytosol	25.79	27.84
CDY13457	Canola	cytosol	25.53	27.56
CDX76775	Canola	nucleus	25.79	27.45
CDY64720	Canola	nucleus	25.53	26.58
CDY64719	Canola	nucleus	25.53	26.58
CDY53471	Canola	nucleus	25.26	26.37
CDY26191	Canola	cytosol	23.68	24.79
CDY34740	Canola	nucleus	25.53	24.49
CDY66303	Canola	plastid	39.74	23.93
CDY19191	Canola	cytosol, nucleus, peroxisome	22.63	21.88
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.05	19.0
CDY22485	Canola	cytosol	26.32	15.22
CDY35434	Canola	cytosol, plastid	26.05	15.07

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078FAX4	UniProt:A0A078FAX4
EnsemblPlants:CDY11515	ProteinID:CDY11515	ProteinID:CDY11515.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00049596001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EF1FD9	SEG:seg	:	:	:

Description

BnaA09g40810DBnaA09g40810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAX4]

Coordinates

chrLK032011:+:761912..763670

Molecular Weight (calculated)

41634.7 Da

IEP (calculated)

5.740

GRAVY (calculated)

-0.259

Length

380 amino acids

Sequence
(BLAST)

001: MGVRFTAENR RILSPSLLPP PLPPPPYTGR PLTATATAFW LPRSLVRHPS LVKTKVSALS VENEFVLDKV EFVPVMRSGA WSDIGSRSSM EDAYLCLDNL
101: MDSYGLKDSE DGPTAFYGVF DGHGGKHAAE FACQRIPRYI VEDQEFPSDI NKVVSSAFLR ADAAFSEACA LDGSLSSGTT ALAAILTGRS LVVANAGDCR
201: AVLSRQGKAI EMSKDHKPMS CKERRRIEAS GGYIYDGYLN GQLNVARAIG DFHMEGMKRK KDGSNGGPLI ADPELMTTKL TEEDEFLIMG CDGVWDVFMS
301: QNAVDFARRR LQEHNDPVMC SKELVEEALK RKSGDNVTAV VVCLQPQPPP NLVAPRLRVQ RSFSAEGLKD LQSYLDDFGC

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.