Factsheet for VIT_04s0008g04780.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61828	Soybean	cytosol	76.32	78.38
KRH52505	Soybean	cytosol	75.53	77.57
PGSC0003DMT400067098	Potato	cytosol, plastid	70.79	71.73
Solyc06g065610.2.1	Tomato	plastid	70.26	71.2
EER88596	Sorghum	cytosol, plastid	67.37	71.11
GSMUA_Achr7P08470_001	Banana	cytosol	71.58	71.02
TraesCS7A01G371100.1	Wheat	plastid	66.05	69.72
GSMUA_Achr10P...	Banana	cytosol	70.26	69.53
Zm00001d046450_P001	Maize	cytosol, plastid	65.53	69.17
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	65.53	68.78
Os06t0597200-01	Rice	cytosol	66.05	68.39
AT2G25620.2	Thale cress	nucleus	70.0	67.86
TraesCS7D01G351600.1	Wheat	cytosol, plastid	65.26	67.76
HORVU7Hr1G085010.2	Barley	plastid	64.74	67.4
CDX76745	Canola	nucleus	67.63	65.56
Bra007784.1-P	Field mustard	nucleus	67.37	65.31
CDY11515	Canola	mitochondrion	63.16	63.16
VIT_11s0118g00700.t01	Wine grape	cytosol	49.74	53.09
VIT_07s0031g02160.t01	Wine grape	cytosol	46.84	49.31
VIT_18s0122g01010.t01	Wine grape	cytosol	46.84	46.23
VIT_07s0005g02110.t01	Wine grape	cytosol	42.37	40.86
VIT_05s0020g00390.t01	Wine grape	plastid	40.53	39.49
VIT_09s0018g01140.t01	Wine grape	nucleus	24.21	25.7
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	25.0	25.13
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	25.79	24.94
VIT_08s0040g00760.t01	Wine grape	cytosol	28.42	16.39

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100256157	wikigene:100256157	MapMan:15.5.38	Gene3D:3.60.40.10
ProteinID:CBI20977	ProteinID:CBI20977.3	UniProt:D7SUM8	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	GO:GO:0050688	InterPro:IPR001932	InterPro:IPR036457
EntrezGene:LOC100256157	wikigene:LOC100256157	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332
SUPFAM:SSF81606	TIGR:TC56755	UniParc:UPI00015C905E	ArrayExpress:VIT_04s0008g04780	EnsemblPlantsGene:VIT_04s0008g04780	EnsemblPlants:VIT_04s0008g04780.t01
unigene:Vvi.4605	RefSeq:XP_002284801	RefSeq:XP_002284801.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:4215069..4225135

Molecular Weight (calculated)

41719.1 Da

IEP (calculated)

5.014

GRAVY (calculated)

-0.361

Length

380 amino acids

Sequence
(BLAST)

001: MEDRKDVING GENGSSSEGR PPNPISSAYR QCFGSAKVNA PCKKSLVRHP SLLKMKTTEN SVESGLSVED HETDFIPIVR SGAWTDVGFR KSMEDVYVCV
101: DNFTSEYGFK NLNEEPNAFY GVFDGHGGKH AADFVCYHLP RFIVEDEDFP REIERVVASA FLQTDNAFAE ACSLDAALAS GTTALAALVV GRSLVVANAG
201: DCRAVLCRRG KAIEMSRDHK PVCSKEKKRI EACGGYVYDG YLNGQLNVAR ALGDWHMEGL KDVDGGPLSA EPEFMTTRLT EEDEFLIIGC DGIWDVFRSQ
301: NAVDFARRRL QEHNDPALCS KDLVDEALKR KSGDNLAAVV VCFQPQAPPN LVAPRPRVQR SISAEGLREL QSFLDGLGKD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.