Factsheet for VIT_07s0031g02160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036796.1-P	Field mustard	nucleus	66.2	75.87
VIT_18s0122g01010.t01	Wine grape	cytosol	77.56	72.73
PGSC0003DMT400059610	Potato	cytosol	74.52	72.51
KRH76528	Soybean	cytosol	74.79	72.19
CDY16304	Canola	nucleus	70.64	71.83
AT3G51470.1	Thale cress	nucleus	71.75	71.75
CDY33277	Canola	nucleus	70.64	71.43
KRH28935	Soybean	nucleus	73.96	71.39
CDX73719	Canola	nucleus	71.19	71.19
CDX78007	Canola	nucleus	71.19	71.19
Bra038901.1-P	Field mustard	nucleus	70.08	70.87
GSMUA_Achr9P23890_001	Banana	plastid	68.7	66.13
GSMUA_Achr11P...	Banana	plastid	67.87	65.86
TraesCS1A01G202300.1	Wheat	plastid	67.04	65.41
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	69.53	65.36
KXG39006	Sorghum	plastid	67.31	65.32
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	69.25	65.27
TraesCS1B01G216500.1	Wheat	plastid	66.76	65.14
Solyc02g082490.2.1	Tomato	cytosol	69.25	65.1
Zm00001d000391_P002	Maize	plastid	67.04	65.05
TraesCS1D01G205700.1	Wheat	plastid	66.48	64.86
GSMUA_Achr4P25900_001	Banana	cytosol	68.14	64.4
Zm00001d029772_P001	Maize	plastid	65.65	63.2
HORVU1Hr1G052160.1	Barley	plastid	67.04	60.65
GSMUA_AchrUn_...	Banana	cytosol	69.81	56.12
VIT_11s0118g00700.t01	Wine grape	cytosol	47.37	48.03
VIT_04s0008g04780.t01	Wine grape	cytosol	49.31	46.84
VIT_07s0005g02110.t01	Wine grape	cytosol	46.81	42.89
VIT_05s0020g00390.t01	Wine grape	plastid	42.11	38.97
VIT_09s0018g01140.t01	Wine grape	nucleus	24.93	25.14
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	25.21	24.07
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	25.48	23.41
VIT_08s0040g00760.t01	Wine grape	cytosol	29.36	16.09

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100243948	wikigene:100243948	MapMan:15.5.38	MapMan:18.4.24.2.7
Gene3D:3.60.40.10	EMBL:AM454394	ProteinID:CAN70009	ProteinID:CAN70009.1	ProteinID:CCB47143	ProteinID:CCB47143.1
UniProt:F6H4D2	EMBL:FN595233	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
EntrezGene:LOC100243948	wikigene:LOC100243948	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF304	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00015C945F	ArrayExpress:VIT_07s0031g02160	EnsemblPlantsGene:VIT_07s0031g02160	EnsemblPlants:VIT_07s0031g02160.t01
unigene:Vvi.20694	RefSeq:XP_002275069	RefSeq:XP_002275069.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:18304633..18309148

Molecular Weight (calculated)

39407.0 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.286

Length

361 amino acids

Sequence
(BLAST)

001: MEDMNDETLD HSNQLNIGKP PRSLSVMRHC ISSARLTGAA DWESDIGIIS LKSPSSEKSG YLPVLRSGSW SEIGPKQYME DEYICIDNFH KHFGAAPNIP
101: SPGAFYGVFD GHGGIDAASF TRKNILKFIV EDAHFPVGIK KAVKSAFAKA DHAFADASSL DRSSGTTALI ALIFGSTMLV ANAGDSRAVL GKRGRAVELS
201: KDHKPNCTSE RLRIEKLGGV IYDGYLNGQL SVARALGDWH MKGPKGSNCP LSSEPELQEI ILTEEDEFLI LGCDGLWDVM SSQCAVTMTR KELMSHNDPE
301: RCSKELVREA LKRNSCDNLT VVVVCFSPDP PPRIEIPKSQ RRRSISAEGL DLLKGVLNSN I

Best Arabidopsis Sequence Match ( AT3G51470.1 )
(BLAST)

001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.