Factsheet for GSMUA_Achr9P23890_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62979	Soybean	cytosol	32.27	75.16
VIT_07s0031g02160.t01	Wine grape	cytosol	66.13	68.7
VIT_18s0122g01010.t01	Wine grape	cytosol	68.53	66.75
Bra036796.1-P	Field mustard	nucleus	56.0	66.67
AT2G33700.1	Thale cress	cytosol	67.47	66.58
CDY17190	Canola	cytosol	65.07	65.07
TraesCS1A01G202300.1	Wheat	plastid	63.73	64.59
KRH51582	Soybean	cytosol	66.13	64.42
Bra005481.1-P	Field mustard	cytosol	64.53	64.36
CDY37699	Canola	cytosol	66.13	64.25
TraesCS1B01G216500.1	Wheat	plastid	63.2	64.05
CDY53789	Canola	cytosol	65.6	63.9
GSMUA_Achr4P25900_001	Banana	cytosol	65.07	63.87
TraesCS1D01G205700.1	Wheat	plastid	62.93	63.78
GSMUA_Achr11P...	Banana	plastid	63.2	63.71
CDY16304	Canola	nucleus	60.27	63.66
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	64.8	63.45
PGSC0003DMT400025874	Potato	cytosol	64.8	63.12
CDY27953	Canola	cytosol	64.27	63.09
KXG39006	Sorghum	plastid	62.4	62.9
Solyc04g082600.2.1	Tomato	cytosol	64.53	62.86
Zm00001d000391_P002	Maize	plastid	62.13	62.63
PGSC0003DMT400059610	Potato	cytosol	61.87	62.53
Zm00001d029772_P001	Maize	plastid	62.4	62.4
CDY33277	Canola	nucleus	59.2	62.18
Bra038901.1-P	Field mustard	nucleus	58.93	61.9
Bra021870.1-P	Field mustard	endoplasmic reticulum	66.13	61.85
CDX78007	Canola	nucleus	59.2	61.5
AT3G51470.1	Thale cress	nucleus	58.93	61.22
CDX73719	Canola	nucleus	58.93	61.22
KRH60899	Soybean	cytosol	52.8	60.0
HORVU1Hr1G052160.1	Barley	plastid	63.47	59.65
KRH28935	Soybean	nucleus	57.87	58.02
KRH76528	Soybean	cytosol	57.33	57.49
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	58.13	56.77
Solyc02g082490.2.1	Tomato	cytosol	57.6	56.25
GSMUA_AchrUn_...	Banana	cytosol	67.2	56.12
GSMUA_Achr3P13350_001	Banana	cytosol	40.0	51.02
GSMUA_AchrUn_...	Banana	cytosol	40.0	50.85
GSMUA_Achr7P08470_001	Banana	cytosol	47.2	46.21
GSMUA_Achr10P...	Banana	cytosol	46.67	45.57
GSMUA_Achr7P20900_001	Banana	nucleus	42.4	44.41
GSMUA_Achr8P22250_001	Banana	cytosol	42.13	42.82
GSMUA_Achr3P08410_001	Banana	cytosol	46.4	42.65
GSMUA_Achr10P...	Banana	cytosol	44.8	42.0
GSMUA_Achr10P...	Banana	cytosol	24.53	27.46
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	22.13	26.27
GSMUA_Achr4P12780_001	Banana	cytosol	24.8	26.12
GSMUA_Achr6P03990_001	Banana	plastid	24.8	20.53
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	27.2	15.38

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006470
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	GO:GO:0061416	EnsemblPlantsGene:GSMUA_Achr9G23890_001	EnsemblPlants:GSMUA_Achr9P23890_001	EnsemblPlants:GSMUA_Achr9T23890_001
InterPro:IPR001932	InterPro:IPR036457	UniProt:M0U2Z6	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295BC4B	SEG:seg	:

Description

Probable protein phosphatase 2C 27 [Source:GMGC_GENE;Acc:GSMUA_Achr9G23890_001]

Coordinates

chr9:-:28719130..28721720

Molecular Weight (calculated)

40504.1 Da

IEP (calculated)

4.594

GRAVY (calculated)

-0.110

Length

375 amino acids

Sequence
(BLAST)

001: MVSGADLTPS LSIMNGGSTP DAEDPEAPEG SRSTRAVRPP RSVIRHCASA ARLDIAAESE FNVGGLGLTS SCSEFSPVLR SGSWTEIGLK QCMEDEHICI
101: DDLVDHIGEN ANISLPGAFY GVFDGHGGTD AAIFVRSNIL KFIIEDGYFP SCMEEAIKSA FLRADYAFAD ACALDITSGT TVLTALIFGR TMYVANAGDC
201: RAVLGRRGRA VELSRDHKPN CSIEKLRIEN LGGVVYDGYL NGQISVARAL GDWHMKGPKG CACPLSAEPE LKETELTEED EFLIMGCDGL WDVMSSQCAV
301: TTARKELMAH NDPERCSQEL VREALKRNSC DNLTVIVVCF SPDPPPQISI QKTTVRRTIS VEGLNFLKGV LDNNV

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.